RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 EIF2S3P41091 472 aaKnown RBP24.86■■□□□ 1.57
TRIM28-204ENST00000594806 SH3BP2P78314 561 aa24.86■■□□□ 1.57
TRIM28-204ENST00000594806 ZKSCAN8Q15776 578 aaPredicted RBP24.86■■□□□ 1.57
TRIM28-204ENST00000594806 TMEM207Q6UWW9 146 aa24.86■■□□□ 1.57
TRIM28-204ENST00000594806 CNPY4Q8N129 248 aa24.86■■□□□ 1.57
TRIM28-204ENST00000594806 LMNTD1Q8N9Z9 388 aa24.86■■□□□ 1.57
TRIM28-204ENST00000594806 DPH1Q9BZG8 443 aa24.86■■□□□ 1.57
TRIM28-204ENST00000594806 FANCEQ9HB96 536 aa24.86■■□□□ 1.57
TRIM28-204ENST00000594806 PDE10AQ9Y233 779 aa24.86■■□□□ 1.57
TRIM28-204ENST00000594806 IKBKGQ9Y6K9 419 aa24.86■■□□□ 1.57
TRIM28-204ENST00000594806 WISP3O95389 354 aaPredicted RBP24.85■■□□□ 1.57
TRIM28-204ENST00000594806 SLC16A8O95907 504 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 FOLR1P15328 257 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 PMS2P54278 862 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 RAB10P61026 200 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 TUBB3Q13509 450 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 EFTUD2Q15029 972 aaKnown RBP eCLIP24.85■■□□□ 1.576e-15■■■■■ 37.3
TRIM28-204ENST00000594806 SF1Q15637 639 aaKnown RBP24.85■■□□□ 1.57
TRIM28-204ENST00000594806 ST3GAL2Q16842 350 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.85■■□□□ 1.57
TRIM28-204ENST00000594806 FBXO38Q6PIJ6 1188 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 PPP1R3BQ86XI6 285 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 C19orf47Q8N9M1 422 aaKnown RBP24.85■■□□□ 1.57
TRIM28-204ENST00000594806 ZNF480Q8WV37 535 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 DLG3Q92796 817 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 ZUFSPQ96AP4 578 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 DERL2Q9GZP9 239 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 FGF21Q9NSA1 209 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 FOXJ2Q9P0K8 574 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.85■■□□□ 1.57
TRIM28-204ENST00000594806 ADAMTS6Q9UKP5 1117 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 RAXQ9Y2V3 346 aa24.85■■□□□ 1.57
TRIM28-204ENST00000594806 STMND1H3BQB6 276 aa24.84■■□□□ 1.57
TRIM28-204ENST00000594806 FAM155BO75949 473 aa24.84■■□□□ 1.57
TRIM28-204ENST00000594806 EBLN1P0CF75 366 aa24.84■■□□□ 1.57
TRIM28-204ENST00000594806 CRABP2P29373 138 aa24.84■■□□□ 1.57
TRIM28-204ENST00000594806 DEKP35659 375 aaKnown RBP24.84■■□□□ 1.57
TRIM28-204ENST00000594806 SERPINB9P50453 376 aa24.84■■□□□ 1.57
TRIM28-204ENST00000594806 LRRC69Q6ZNQ3 347 aa24.84■■□□□ 1.57
TRIM28-204ENST00000594806 SYTL1Q8IYJ3 562 aa24.84■■□□□ 1.57
TRIM28-204ENST00000594806 C2orf73Q8N5S3 287 aaPredicted RBP24.84■■□□□ 1.57
TRIM28-204ENST00000594806 KCNE4Q8WWG9 221 aa24.84■■□□□ 1.57
TRIM28-204ENST00000594806 SLC44A1Q8WWI5 657 aa24.84■■□□□ 1.57
TRIM28-204ENST00000594806 TXLNGYQ9BZA5 131 aa24.84■■□□□ 1.57
TRIM28-204ENST00000594806 APMAPQ9HDC9 416 aa24.84■■□□□ 1.57
TRIM28-204ENST00000594806 KLK4Q9Y5K2 254 aa24.84■■□□□ 1.57
TRIM28-204ENST00000594806 A0A087WV48 116 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 A0A1W2PPV9 198 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 TARM1B6A8C7 271 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 E7ENX8 843 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 INHBAP08476 426 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 LIPCP11150 499 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 PVRP15151 417 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 SLC26A3P40879 764 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 PGGT1BP53609 377 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 TAP2Q03519 686 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 ZNF460Q14592 562 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 KCNAB1Q14722 419 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 TAOK1Q7L7X3 1001 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 ADAMTSL2Q86TH1 951 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 TAX1BP1Q86VP1 789 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 SPNS2Q8IVW8 549 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 OR2A1Q8NGT9 310 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 ATL1Q8WXF7 558 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 CTRCQ99895 268 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 PCBD2Q9H0N5 130 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 ANKZF1Q9H8Y5 726 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 CAB39LQ9H9S4 337 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 ZNF180Q9UJW8 692 aa24.83■■□□□ 1.57
TRIM28-204ENST00000594806 TMEM184BQ9Y519 407 aaPredicted RBP24.83■■□□□ 1.57
TRIM28-204ENST00000594806 SDK2Q58EX2 2172 aa24.83■■□□□ 1.56
TRIM28-204ENST00000594806 FRYQ5TBA9 3013 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 KRT87PA6NCN2 255 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 RIPK2O43353 540 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 CCNDBP1O95273 360 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 FAM153BP0C7A2 387 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 CCND1P24385 295 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 CNTFP26441 200 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 IMPA1P29218 277 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 CMPK1P30085 196 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 RPA3P35244 121 aaPredicted RBP24.82■■□□□ 1.56
TRIM28-204ENST00000594806 ATP6V0D1P61421 351 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 FASTKQ14296 549 aaKnown RBP24.82■■□□□ 1.56
TRIM28-204ENST00000594806 PHKG1Q16816 387 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 FAM153CQ494X1 144 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 TRIM73Q86UV7 250 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 OR2L3Q8NG85 312 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 ANKRD49Q8WVL7 239 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 PMEPA1Q969W9 287 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 ZNF501Q96CX3 271 aaPredicted RBP24.82■■□□□ 1.56
TRIM28-204ENST00000594806 SPRY4Q9C004 299 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 ARL15Q9NXU5 204 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 STOX2Q9P2F5 926 aaPredicted RBP24.82■■□□□ 1.56
TRIM28-204ENST00000594806 CTNNAL1Q9UBT7 734 aa24.82■■□□□ 1.56
TRIM28-204ENST00000594806 PHGDHO43175 533 aaKnown RBP24.81■■□□□ 1.56
TRIM28-204ENST00000594806 MSH2P43246 934 aa24.81■■□□□ 1.56
TRIM28-204ENST00000594806 ABATP80404 500 aa24.81■■□□□ 1.56
TRIM28-204ENST00000594806 CDKL1Q00532 357 aa24.81■■□□□ 1.56
TRIM28-204ENST00000594806 MAP7Q14244 749 aa24.81■■□□□ 1.56
TRIM28-204ENST00000594806 UAP1Q16222 522 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms