RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 INPP5JQ15735 1006 aaPredicted RBP12.71□□□□□ -0.37
H3F3B-213ENST00000593254 CYP1B1Q16678 543 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 TYSND1Q2T9J0 566 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 DEFB110Q30KQ9 67 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 PTCHD3Q3KNS1 767 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 CTSL3PQ5NE16 218 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 C1QL3Q5VWW1 255 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 ANKRD22Q5VYY1 191 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 KIAA0930Q6ICG6 404 aaPredicted RBP12.71□□□□□ -0.37
H3F3B-213ENST00000593254 MRNIPQ6NTE8 343 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 CES3Q6UWW8 571 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 CFAP61Q8NHU2 1237 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 ADAMTS17Q8TE56 1095 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 LPGAT1Q92604 370 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 PBKQ96KB5 322 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 BIRC8Q96P09 236 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 TCFL5Q9UL49 500 aa12.71□□□□□ -0.37
H3F3B-213ENST00000593254 CNTRLQ7Z7A1 2325 aa12.71□□□□□ -0.38
H3F3B-213ENST00000593254 GOLGA8KD6RF30 607 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 GOLGA8TH3BQL2 631 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 AVILO75366 819 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 OR2B3O76000 313 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 TMEM63AO94886 807 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 CD9P21926 228 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 ADARP55265 1226 aaKnown RBP12.7□□□□□ -0.38
H3F3B-213ENST00000593254 EIF3BP55884 814 aaKnown RBP12.7□□□□□ -0.38
H3F3B-213ENST00000593254 NCF4Q15080 339 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 PRR30Q53SZ7 412 aaPredicted RBP12.7□□□□□ -0.38
H3F3B-213ENST00000593254 RNF187Q5TA31 235 aaPredicted RBP12.7□□□□□ -0.38
H3F3B-213ENST00000593254 RHBDD2Q6NTF9 364 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 OTOAQ7RTW8 1153 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 SDCCAG8Q86SQ7 713 aaPredicted RBP12.7□□□□□ -0.38
H3F3B-213ENST00000593254 CAND1Q86VP6 1230 aaKnown RBP12.7□□□□□ -0.38
H3F3B-213ENST00000593254 DNAJC22Q8N4W6 341 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 OTUD6BQ8N6M0 293 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 Q8NA96 180 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 OR2L8Q8NGY9 312 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 N4BP2L2Q92802 583 aaPredicted RBP12.7□□□□□ -0.38
H3F3B-213ENST00000593254 MAGOHBQ96A72 148 aaKnown RBP12.7□□□□□ -0.38
H3F3B-213ENST00000593254 MS4A14Q96JA4 679 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 TCF12Q99081 682 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 SLC25A23Q9BV35 468 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 SLC7A5P2Q9GIP4 190 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 CIDEBQ9UHD4 219 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 SNX7Q9UNH6 387 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 AP1M2Q9Y6Q5 423 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 MTORP42345 2549 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 DCHS2Q6V1P9 2916 aa12.7□□□□□ -0.38
H3F3B-213ENST00000593254 MDC1Q14676 2089 aaKnown RBP12.69□□□□□ -0.38
H3F3B-213ENST00000593254 RASGRF2O14827 1237 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 PFDN6O15212 129 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 S1PR4O95977 384 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 ESR1P03372 595 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 MLNP12872 115 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 OGNP20774 298 aaKnown RBP12.69□□□□□ -0.38
H3F3B-213ENST00000593254 MAGP20916 626 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 COILP38432 576 aaPredicted RBP12.69□□□□□ -0.38
H3F3B-213ENST00000593254 TERF1P54274 439 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 GBX1Q14549 363 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 FAM69BQ5VUD6 431 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 CPZQ66K79 652 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 CCDC137Q6PK04 289 aaKnown RBP12.69□□□□□ -0.38
H3F3B-213ENST00000593254 REXO1L1PQ8IX06 675 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 FAM20CQ8IXL6 584 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 LMNTD1Q8N9Z9 388 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 MCUQ8NE86 351 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 GSDMBQ8TAX9 411 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 PRR7Q8TB68 274 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 PROKR1Q8TCW9 393 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 RAD51AP1Q96B01 352 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 SLC22A18Q96BI1 424 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 IL17FQ96PD4 163 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 GBP5Q96PP8 586 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 NAP1L3Q99457 506 aaPredicted RBP12.69□□□□□ -0.38
H3F3B-213ENST00000593254 DHRS4Q9BTZ2 278 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 RAB11FIP5Q9BXF6 653 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 SPRTNQ9H040 489 aaPredicted RBP12.69□□□□□ -0.38
H3F3B-213ENST00000593254 XAB2Q9HCS7 855 aaKnown RBP12.69□□□□□ -0.38
H3F3B-213ENST00000593254 PLCL2Q9UPR0 1127 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 NEU2Q9Y3R4 380 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 MRFAP1Q9Y605 127 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 NFS1Q9Y697 457 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 PCSK5Q92824 1860 aa12.69□□□□□ -0.38
H3F3B-213ENST00000593254 NUP210LQ5VU65 1888 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 FAM237BA0A1B0GVD1 139 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 C9J4A7 227 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 H3BMM5 538 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 PGRMC1O00264 195 aaKnown RBP12.68□□□□□ -0.38
H3F3B-213ENST00000593254 ZSCAN9O15535 394 aaPredicted RBP12.68□□□□□ -0.38
H3F3B-213ENST00000593254 PRICKLE3O43900 615 aaPredicted RBP12.68□□□□□ -0.38
H3F3B-213ENST00000593254 NIPSNAP2O75323 286 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 FKBP9O95302 570 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 C1orf105O95561 183 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 CTSBP07858 339 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 CBSLP0DN79 551 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 PAMP19021 973 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 AGXTP21549 392 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 ATP5DP30049 168 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 FMO4P31512 558 aa12.68□□□□□ -0.38
H3F3B-213ENST00000593254 CBSP35520 551 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms