RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ARHGEF33A8MVX0 844 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 TERTO14746 1132 aaKnown RBP11.63□□□□□ -0.55
TPM4-212ENST00000590180 HCRTR1O43613 425 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 ZBTB14O43829 449 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 C1QL1O75973 258 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 SEC31AO94979 1220 aaKnown RBP11.63□□□□□ -0.55
TPM4-212ENST00000590180 SYF2O95926 243 aaKnown RBP11.63□□□□□ -0.55
TPM4-212ENST00000590180 AHSGP02765 367 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 MSL3P1P0C860 447 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 SFTPCP11686 197 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 AGXTP21549 392 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 MCM3P25205 808 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 PTPN4P29074 926 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 RPL21P46778 160 aaKnown RBP11.63□□□□□ -0.55
TPM4-212ENST00000590180 PDIA2Q13087 525 aaKnown RBP11.63□□□□□ -0.55
TPM4-212ENST00000590180 FASTKQ14296 549 aaKnown RBP11.63□□□□□ -0.55
TPM4-212ENST00000590180 GBX1Q14549 363 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 PTCHD3Q3KNS1 767 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 LCN10Q6JVE6 187 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 UGT3A1Q6NUS8 523 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 CYHR1Q6ZMK1 362 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 NEK10Q6ZWH5 1172 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 MAATS1Q7Z4T9 603 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 DSELQ8IZU8 1212 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 ZNF655Q8N720 491 aaPredicted RBP11.63□□□□□ -0.55
TPM4-212ENST00000590180 SPATA4Q8NEY3 305 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 KCNJ9Q92806 393 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 ZUFSPQ96AP4 578 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 LRRC39Q96DD0 335 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 CERS2Q96G23 380 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 LRFN5Q96NI6 719 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 PKP4Q99569 1192 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 NDNQ99608 321 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 CHRNA10Q9GZZ6 450 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 DPH5Q9H2P9 285 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 ACTL8Q9H568 366 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 ABCF3Q9NUQ8 709 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 PCMTD2Q9NV79 361 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 EURLQ9NYK6 297 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 SPATA7Q9P0W8 599 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 TRMT6Q9UJA5 497 aaKnown RBP11.63□□□□□ -0.55
TPM4-212ENST00000590180 AP1M2Q9Y6Q5 423 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 COL6A6A6NMZ7 2263 aa11.63□□□□□ -0.55
TPM4-212ENST00000590180 NDC80O14777 642 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 PRICKLE3O43900 615 aaPredicted RBP11.62□□□□□ -0.55
TPM4-212ENST00000590180 PSIP1O75475 530 aaKnown RBP11.62□□□□□ -0.55
TPM4-212ENST00000590180 CTSBP07858 339 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 MPC1LP0DKB6 136 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 ENO3P13929 434 aaPredicted RBP11.62□□□□□ -0.55
TPM4-212ENST00000590180 ALAS2P22557 587 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 GABRB3P28472 473 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 RPA3P35244 121 aaPredicted RBP11.62□□□□□ -0.55
TPM4-212ENST00000590180 SKIV2L2P42285 1042 aaKnown RBP11.62□□□□□ -0.55
TPM4-212ENST00000590180 GABRA4P48169 554 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 RPS18P62269 152 aaKnown RBP11.62□□□□□ -0.55
TPM4-212ENST00000590180 C2orf54Q08AI8 447 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 NFATC3Q12968 1075 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 CALCOCO2Q13137 446 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 CYP2A13Q16696 494 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 CRTC2Q53ET0 693 aaPredicted RBP11.62□□□□□ -0.55
TPM4-212ENST00000590180 ZC3H12BQ5HYM0 836 aaKnown RBP11.62□□□□□ -0.55
TPM4-212ENST00000590180 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.62□□□□□ -0.55
TPM4-212ENST00000590180 TEDDM1Q5T9Z0 273 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 C1orf189Q5VU69 101 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 MLIPQ5VWP3 458 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 FCRL6Q6DN72 434 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 TLDC1Q6P9B6 456 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 KIAA0408Q6ZU52 694 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 ZNF605Q86T29 641 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 PALM2Q8IXS6 379 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 CPNE9Q8IYJ1 553 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 SYTL1Q8IYJ3 562 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 GIMAP7Q8NHV1 300 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 CD200R1Q8TD46 325 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 DENND1AQ8TEH3 1009 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 APOBEC4Q8WW27 367 aaKnown RBP11.62□□□□□ -0.55
TPM4-212ENST00000590180 ASB11Q8WXH4 323 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 SMPDL3AQ92484 453 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 ERP44Q9BS26 406 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 NDC1Q9BTX1 674 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 ACAT2Q9BWD1 397 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 TXLNGQ9NUQ3 528 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 GEMIN8Q9NWZ8 242 aaKnown RBP11.62□□□□□ -0.55
TPM4-212ENST00000590180 TAS2R13Q9NYV9 303 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 POLHQ9Y253 713 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 MED16Q9Y2X0 877 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 PCDHGA6Q9Y5G7 932 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 TEX264Q9Y6I9 313 aa11.62□□□□□ -0.55
TPM4-212ENST00000590180 ZNF839A8K0R7 811 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 TARM1B6A8C7 271 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 C9J4A7 227 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 ZSCAN9O15535 394 aaPredicted RBP11.61□□□□□ -0.55
TPM4-212ENST00000590180 RAD51CO43502 376 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 FKBP9O95302 570 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 RECKO95980 971 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 FURINP09958 794 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 CBSLP0DN79 551 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 PSMB5P28074 263 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 CMPK1P30085 196 aa11.61□□□□□ -0.55
TPM4-212ENST00000590180 RORAP35398 523 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms