RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	BOP1	Q14137	746 aa	Known RBP	13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ARHGEF7	Q14155	803 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	RAB39A	Q14964	217 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SMAD2	Q15796	467 aa	Known RBP	13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CHRNA6	Q15825	494 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FAM174B	Q3ZCQ3	159 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FBXO48	Q5FWF7	155 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ISLR2	Q6UXK2	745 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	HTR3D	Q70Z44	454 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FBXL6	Q8N531	539 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	OR2AP1	Q8NGE2	309 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	MCOLN3	Q8TDD5	553 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SLC22A17	Q8WUG5	538 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ESAM	Q96AP7	390 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	REXO5	Q96IC2	774 aa	Known RBP	13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FBXL20	Q96IG2	436 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CCDC138	Q96M89	665 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ZNF558	Q96NG5	402 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SLC12A9	Q9BXP2	914 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CPEB1	Q9BZB8	566 aa	Known RBP	13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CEP44	Q9C0F1	390 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ACTL8	Q9H568	366 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	MRPL17	Q9NRX2	175 aa	Known RBP	13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	DCAF13	Q9NV06	445 aa	Known RBP	13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ARL15	Q9NXU5	204 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	RPS6KA6	Q9UK32	745 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	BAG5	Q9UL15	447 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CORO2B	Q9UQ03	480 aa		13.7	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SH3PXD2B	A1X283	911 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	IQCF5	A8MTL0	148 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	LOC730098	B7Z3J9	87 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PER2	O15055	1255 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ADAM12	O43184	909 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	MBTPS2	O43462	519 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	NUAK1	O60285	661 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	MYO1D	O94832	1006 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	AP2A2	O94973	939 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CCNDBP1	O95273	360 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	BPI	P17213	487 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	NELFE	P18615	380 aa	Known RBP	13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CCNA2	P20248	432 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PRPS1L1	P21108	318 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	MAP4	P27816	1152 aa	Known RBP	13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PCSK6	P29122	969 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	GPNMB	Q14956	572 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	MOG	Q16653	247 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	USP39	Q53GS9	565 aa	Known RBP	13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SPOUT1	Q5T280	376 aa	Known RBP	13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CALHM3	Q86XJ0	350 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	RGL4	Q8IZJ4	473 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PGBD3	Q8N328	593 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	L3MBTL4	Q8NA19	623 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	OR13F1	Q8NGS4	319 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	OR10A6	Q8NH74	314 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SELENOM	Q8WWX9	145 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ATL1	Q8WXF7	558 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	NCLN	Q969V3	563 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SCRN2	Q96FV2	425 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SAMD11	Q96NU1	681 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ASPSCR1	Q9BZE9	553 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	NTN4	Q9HB63	628 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	FAM118A	Q9NWS6	357 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ELOVL2	Q9NXB9	296 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SLAMF8	Q9P0V8	285 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	EVL	Q9UI08	416 aa	Predicted RBP	13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ERVW-1	Q9UQF0	538 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CROCC	Q5TZA2	2017 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CACNA1H	O95180	2353 aa		13.69	□□□□□ -0.22
NEDD4L-223	ENST00000588516	C2orf78	A6NCI8	922 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	DFNA5	O60443	496 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CBFA2T3	O75081	653 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	E2F6	O75461	281 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CREG1	O75629	220 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SEC14L2	O76054	403 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CLDN7	O95471	211 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	POP4	O95707	220 aa	Known RBP	13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ALPI	P09923	528 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CCDC159	P0C7I6	412 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CYP2A6	P11509	494 aa	Predicted RBP	13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	BCKDHA	P12694	445 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	HSD3B1	P14060	373 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	ZNF12	P17014	697 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	LAG3	P18627	525 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	HSD3B2	P26439	372 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	RYK	P34925	604 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PNLIPRP1	P54315	467 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CSNK2B	P67870	215 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SLC7A9	P82251	487 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CSTF3	Q12996	717 aa	Known RBP	13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	PMS2P3	Q13401	168 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	CDKN3	Q16667	212 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	TCTN1	Q2MV58	587 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	LIPJ	Q5W064	366 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	UBE2R2	Q712K3	238 aa	Predicted RBP	13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	SERPINA11	Q86U17	422 aa		13.68	□□□□□ -0.22
NEDD4L-223	ENST00000588516	BEND7	Q8N7W2	519 aa	Predicted RBP	13.68	□□□□□ -0.22

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