RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ERI2A8K979 691 aaKnown RBP13.57□□□□□ -0.24
ERCC1-205ENST00000587888 SOCS6O14544 535 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 DSCR3O14972 297 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 GPC4O75487 556 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 S1PR4O95977 384 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 RPN2P04844 631 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 ETS1P14921 441 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 AOAHP28039 575 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 STIP1P31948 543 aaKnown RBP13.57□□□□□ -0.24
ERCC1-205ENST00000587888 GCGRP47871 477 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 GRB7Q14451 532 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 GRM7Q14831 915 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 AGAP7PQ5VUJ5 663 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 IRAK1BP1Q5VVH5 260 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 TTC23LQ6PF05 361 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 ZNF534Q76KX8 674 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 DTWD1Q8N5C7 304 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 TTC29Q8NA56 475 aaPredicted RBP13.57□□□□□ -0.24
ERCC1-205ENST00000587888 OR2L8Q8NGY9 312 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 GSDMBQ8TAX9 411 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 SKA2Q8WVK7 121 aaPredicted RBP13.57□□□□□ -0.24
ERCC1-205ENST00000587888 UBE2Q2Q8WVN8 375 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 FKBP10Q96AY3 582 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 CNDP1Q96KN2 507 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 AGAP4Q96P64 663 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 WDR77Q9BQA1 342 aaPredicted RBP13.57□□□□□ -0.24
ERCC1-205ENST00000587888 SELENOSQ9BQE4 189 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 WDR54Q9H977 334 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 CHRAC1Q9NRG0 131 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 ZNF148Q9UQR1 794 aa13.57□□□□□ -0.24
ERCC1-205ENST00000587888 RASGRF2O14827 1237 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 SNRNP200O75643 2136 aaKnown RBP13.56□□□□□ -0.24
ERCC1-205ENST00000587888 SUN1O94901 812 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 ALBP02768 609 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 FDFT1P37268 417 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 VSX2P58304 361 aaPredicted RBP13.56□□□□□ -0.24
ERCC1-205ENST00000587888 KIF5AQ12840 1032 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 CDC16Q13042 620 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 SNX1Q13596 522 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 RBBP7Q16576 425 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 FAM214AQ32MH5 1076 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 TCTE1Q5JU00 501 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 WASHC2DQ5SRD0 308 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 PTRHD1Q6GMV3 140 aaKnown RBP13.56□□□□□ -0.24
ERCC1-205ENST00000587888 KIRREL2Q6UWL6 708 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 UNC5DQ6UXZ4 953 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 COX15Q7KZN9 410 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 NLRP9Q7RTR0 991 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 KCNMB4Q86W47 210 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 DCUN1D3Q8IWE4 304 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 C1orf54Q8WWF1 131 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 NACC2Q96BF6 587 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 THOC3Q96J01 351 aaKnown RBP13.56□□□□□ -0.24
ERCC1-205ENST00000587888 SPSB2Q99619 263 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 BARD1Q99728 777 aaKnown RBP13.56□□□□□ -0.24
ERCC1-205ENST00000587888 MIPEPQ99797 713 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 RAB6BQ9NRW1 208 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 CATSPERZQ9NTU4 200 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 MARCH4Q9P2E8 410 aaPredicted RBP13.56□□□□□ -0.24
ERCC1-205ENST00000587888 STOX2Q9P2F5 926 aaPredicted RBP13.56□□□□□ -0.24
ERCC1-205ENST00000587888 CTSFQ9UBX1 484 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 TTC7AQ9ULT0 858 aaPredicted RBP13.56□□□□□ -0.24
ERCC1-205ENST00000587888 NOVA2Q9UNW9 492 aaKnown RBP13.56□□□□□ -0.24
ERCC1-205ENST00000587888 HS3ST3B1Q9Y662 390 aa13.56□□□□□ -0.24
ERCC1-205ENST00000587888 KRT87PA6NCN2 255 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 CD3EAPO15446 510 aaKnown RBP13.55□□□□□ -0.24
ERCC1-205ENST00000587888 LIASO43766 372 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 CTSVO60911 334 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 SLCO2B1O94956 709 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 ONECUT2O95948 504 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 EIF2S1P05198 315 aaKnown RBP13.55□□□□□ -0.24
ERCC1-205ENST00000587888 PSMB5P28074 263 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 ACVR1Q04771 509 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 TMED2Q15363 201 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 TUBB8Q3ZCM7 444 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 CCSMST1Q4G0I0 132 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 YOD1Q5VVQ6 348 aaPredicted RBP13.55□□□□□ -0.24
ERCC1-205ENST00000587888 LINC00696Q6ZRV3 163 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 PRSS58Q8IYP2 241 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 ST6GALNAC3Q8NDV1 305 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 PPHLN1Q8NEY8 458 aaKnown RBP13.55□□□□□ -0.24
ERCC1-205ENST00000587888 PPP4R1Q8TF05 950 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 ZUFSPQ96AP4 578 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 MRFAP1L1Q96HT8 127 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 HES6Q96HZ4 224 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 BAG1Q99933 345 aaPredicted RBP13.55□□□□□ -0.24
ERCC1-205ENST00000587888 MESP1Q9BRJ9 268 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 DESI2Q9BSY9 194 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 LHPPQ9H008 270 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 ZC3H7BQ9UGR2 993 aaKnown RBP13.55□□□□□ -0.24
ERCC1-205ENST00000587888 TSR3Q9UJK0 312 aaKnown RBP13.55□□□□□ -0.24
ERCC1-205ENST00000587888 RIMKLBQ9ULI2 386 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 OSGIN2Q9Y236 505 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 TCAF1Q9Y4C2 921 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 NFS1Q9Y697 457 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 MDC1Q14676 2089 aaKnown RBP13.55□□□□□ -0.24
ERCC1-205ENST00000587888 ANKRD12Q6UB98 2062 aa13.55□□□□□ -0.24
ERCC1-205ENST00000587888 LOC105369274A0A096LPK9 316 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 LOC102723532A0A0G2JNH3 316 aa13.54□□□□□ -0.24
ERCC1-205ENST00000587888 A0A0J9YVX5 310 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms