RNA–Protein interactions for RNA: ENST00000584692.1

RHOT1-216, Transcript of ras homolog family member T1, human

TSL 2

Gene RHOT1, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-216	ENST00000584692	CDH3	P22223	829 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	JAK1	P23458	1154 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	CLK1	P49759	484 aa	Known RBP	4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	NOTCH2	Q04721	2471 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	ITGA7	Q13683	1181 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	HERC3	Q15034	1050 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	VWC2	Q2TAL6	325 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	CRY2	Q49AN0	593 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	C6orf163	Q5TEZ5	329 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	PLPPR4	Q7Z2D5	763 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	NUP54	Q7Z3B4	507 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	ARHGAP22	Q7Z5H3	698 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	CDK20	Q8IZL9	346 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	DCLK2	Q8N568	766 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	THAP8	Q8NA92	274 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	POM121L2	Q96KW2	1035 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	FAM20A	Q96MK3	541 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	ZNF599	Q96NL3	588 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	SLF1	Q9BQI6	1058 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	SHARPIN	Q9H0F6	387 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	P2RY12	Q9H244	342 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	TRPV4	Q9HBA0	871 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	ANKEF1	Q9NU02	776 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	KLHL8	Q9P2G9	620 aa	Predicted RBP	4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	SLC24A2	Q9UI40	661 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	STUB1	Q9UNE7	303 aa		4.25	□□□□□ -1.73
RHOT1-216	ENST00000584692	EDDM13	A0A1B0GTR0	161 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692		A0A1B0GU03	582 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	SPRY1	O43609	319 aa	Predicted RBP	4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	TYMP	P19971	482 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	BDNF	P23560	247 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	PTGER4	P35408	488 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	ALDH3A2	P51648	485 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	MAPK12	P53778	367 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	UGP2	Q16851	508 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	LETM2	Q2VYF4	491 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	SLC25A53	Q5H9E4	307 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	MAPK1IP1L	Q8NDC0	245 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	OR2T6	Q8NHC8	308 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	LINC00615	Q96LM1	132 aa	Predicted RBP	4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	LINC00479	Q96M42	142 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	FUCA2	Q9BTY2	467 aa		4.24	□□□□□ -1.73
RHOT1-216	ENST00000584692	GLRA3	O75311	464 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	C22orf31	O95567	290 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	PCGF2	P35227	344 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	CAPZA2	P47755	286 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	LHX1	P48742	406 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	ASCL1	P50553	236 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	LIMK1	P53667	647 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	HNRNPD	Q14103	355 aa	Known RBP	4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	SQLE	Q14534	574 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	TNIP1	Q15025	636 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	KRT74	Q7RTS7	529 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	LACC1	Q8IV20	430 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	ZNF614	Q8N883	585 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	NIPA2	Q8N8Q9	360 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	BMPER	Q8N8U9	685 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	DBF4B	Q8NFT6	615 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	PIGB	Q92521	554 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	TAF15	Q92804	592 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	MOB3A	Q96BX8	217 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	LRRC3B	Q96PB8	259 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	EGLN1	Q9GZT9	426 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	EXOG	Q9Y2C4	368 aa	Known RBP	4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	TMED3	Q9Y3Q3	217 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	RPS6KL1	Q9Y6S9	549 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692	RNF215	Q9Y6U7	377 aa		4.23	□□□□□ -1.73
RHOT1-216	ENST00000584692		O00370	1275 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	CDK2AP2	O75956	126 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	GP1BB	P13224	206 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	MC5R	P33032	325 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	CSTF2	P33240	577 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	RPL21	P46778	160 aa	Known RBP	4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	SLC6A12	P48065	614 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	CSE1L	P55060	971 aa	Known RBP	4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	CALD1	Q05682	793 aa	Known RBP	4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	AIMP1	Q12904	312 aa	Known RBP	4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	RALGDS	Q12967	914 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	CUL3	Q13618	768 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	MCMDC2	Q4G0Z9	681 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	SLC35D3	Q5M8T2	416 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	FAAP20	Q6NZ36	180 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	IQCH	Q86VS3	1027 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	MMD2	Q8IY49	270 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	TTC30B	Q8N4P2	665 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	RAB42	Q8N4Z0	105 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	XXYLT1	Q8NBI6	393 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	ZNF485	Q8NCK3	441 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	PGAP3	Q96FM1	320 aa	Predicted RBP	4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	MAGED4	Q96JG8	741 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	C10orf90	Q96M02	699 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	MUS81	Q96NY9	551 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	FEV	Q99581	238 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	THAP2	Q9H0W7	228 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692		Q9H8V8	135 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	NKIRAS2	Q9NYR9	191 aa		4.22	□□□□□ -1.73
RHOT1-216	ENST00000584692	OR6C2	Q9NZP2	312 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms