RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 OASLQ15646 514 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 TCTE1Q5JU00 501 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MRPL14Q6P1L8 145 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 ZNF534Q76KX8 674 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 FAM20CQ8IXL6 584 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 KRT222Q8N1A0 295 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 ZADH2Q8N4Q0 377 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 C2orf73Q8N5S3 287 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 OR2L8Q8NGY9 312 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 LKAAEAR1Q8TD35 194 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 VPS50Q96JG6 964 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CARD6Q9BX69 1037 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MRM3Q9HC36 420 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 ATP13A2Q9NQ11 1180 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 RNF14Q9UBS8 474 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CIDEBQ9UHD4 219 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 NXT1Q9UKK6 140 aaKnown RBP8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 FER1L5A0AVI2 2057 aa8.37□□□□□ -1.07
CDK5RAP3-229ENST00000583697 FLNBO75369 2602 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 A1L4Q6 167 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 IQCF5A8MTL0 148 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 AGPSO00116 658 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 AP3B1O00203 1094 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PRMT5O14744 637 aaPredicted RBP8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 DSCR3O14972 297 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 KPNA5O15131 536 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PFDN6O15212 129 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SEMA7AO75326 666 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 DDAH2O95865 285 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 FGGP02679 453 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CTSBP07858 339 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 TPBGLP0DKB5 382 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 ERVK-10P10266 1014 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 ITGAXP20702 1163 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MMP11P24347 488 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 GRIA1P42261 906 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 BDKRB1P46663 353 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 FOXL2P58012 376 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 AIMP2Q13155 320 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SNX1Q13596 522 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SEMA3AQ14563 771 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 NAA25Q14CX7 972 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 NR6A1Q15406 480 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 EIF2S3LQ2VIR3 472 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 TUBB8Q3ZCM7 444 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PCID2Q5JVF3 399 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 YOD1Q5VVQ6 348 aaPredicted RBP8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CNSTQ6PJW8 725 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 OTOAQ7RTW8 1153 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PPP1R32Q7Z5V6 425 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 LDB1Q86U70 411 aaPredicted RBP8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SLC13A5Q86YT5 568 aaPredicted RBP8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 VRK3Q8IV63 474 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MPP5Q8N3R9 675 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 DNAJC22Q8N4W6 341 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 LINC01555Q8NAE3 123 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MAGEC3Q8TD91 643 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 COG1Q8WTW3 980 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 RAD51AP1Q96B01 352 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 NACC2Q96BF6 587 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SNRNP40Q96DI7 357 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CAPZA3Q96KX2 299 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 ZNF778Q96MU6 729 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 FOPNLQ96NB1 174 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 IL17FQ96PD4 163 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 WDR77Q9BQA1 342 aaPredicted RBP8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SELENOSQ9BQE4 189 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 IL22Q9GZX6 179 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 EPS8L2Q9H6S3 715 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 ZNF552Q9H707 407 aaPredicted RBP8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 WDR54Q9H977 334 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 EIF2B3Q9NR50 452 aaKnown RBP8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 AGPAT4Q9NRZ5 378 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 HOMER3Q9NSC5 361 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CUTCQ9NTM9 273 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 KLHL20Q9Y2M5 609 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SPTA1P02549 2419 aa8.36□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PGRMC1O00264 195 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CD3EAPO15446 510 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CNOT3O75175 753 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 GPC4O75487 556 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 NDUFS3O75489 264 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 FKBP9O95302 570 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 ALBP02768 609 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 UMODP07911 640 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 UQCRHP07919 91 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 CCNFP41002 786 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 GLRBP48167 497 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 EIF3BP55884 814 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 SESN2P58004 480 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 RBBP7Q16576 425 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 FAM214AQ32MH5 1076 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 RNF187Q5TA31 235 aaPredicted RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PRAMEF13Q5VWM6 474 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 IGFL3Q6UXB1 125 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 GSTA5Q7RTV2 222 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 PRUNE1Q86TP1 453 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 LRRC6Q86X45 466 aa8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 MCATQ8IVS2 390 aaKnown RBP8.35□□□□□ -1.07
CDK5RAP3-229ENST00000583697 RASGEF1CQ8N431 466 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms