RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 SLC35G6P0C7Q6 338 aa14.24□□□□□ -0.13
CSNK1D-217ENST00000581241 DSTNP60981 165 aa14.24□□□□□ -0.13
CSNK1D-217ENST00000581241 CES5AQ6NT32 575 aa14.24□□□□□ -0.13
CSNK1D-217ENST00000581241 PCED1BQ96HM7 432 aa14.24□□□□□ -0.13
CSNK1D-217ENST00000581241 CDK15Q96Q40 435 aa14.24□□□□□ -0.13
CSNK1D-217ENST00000581241 ZBTB26Q9HCK0 441 aa14.24□□□□□ -0.13
CSNK1D-217ENST00000581241 ACTR3BQ9P1U1 418 aa14.24□□□□□ -0.13
CSNK1D-217ENST00000581241 TBC1D14Q9P2M4 693 aa14.24□□□□□ -0.13
CSNK1D-217ENST00000581241 GTF2IRD1Q9UHL9 959 aa14.24□□□□□ -0.13
CSNK1D-217ENST00000581241 PTPRJQ12913 1337 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TBC1D3DA0A087WVF3 549 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TBC1D3IA0A087WXS9 549 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TBC1D3EA0A087X179 549 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TBC1D3KA0A087X1G2 549 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 A0A1W2PRB8 838 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TBC1D3FA6NER0 549 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 WTIPA6NIX2 430 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 A8MT66 165 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 CXorf49A8MYA2 514 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TBC1D3LB9A6J9 549 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 CLDN4O14493 209 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 PRNPP04156 253 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 CD2P06729 351 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TBC1D3HP0C7X1 549 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 DAOAP59103 153 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TBC1D3GQ6DHY5 549 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TBC1D3CQ6IPX1 549 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 PTF1AQ7RTS3 328 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 FAM124AQ86V42 546 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 AMIGO1Q86WK6 493 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TBC1D3Q8IZP1 549 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TMEM199Q8N511 208 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 COX18Q8N8Q8 333 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TMED9Q9BVK6 235 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 PCDHGC4Q9Y5F7 938 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 ECI2O75521 394 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 HK1P19367 917 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 PPM1AP35813 382 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 NDUFV1P49821 464 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 PUM1Q14671 1186 aaKnown RBP eCLIP14.23□□□□□ -0.136e-6■■□□□ 13.7
CSNK1D-217ENST00000581241 SMU1Q2TAY7 513 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 CERKQ8TCT0 537 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 DPF3Q92784 378 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 CGREF1Q99674 301 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 SLC30A2Q9BRI3 323 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 RNF38Q9H0F5 515 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 RRAGCQ9HB90 399 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 MKKSQ9NPJ1 570 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 AFDNP55196 1824 aaKnown RBP14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 MYOM1P52179 1685 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 ZNF208O43345 1280 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 VNN1O95497 513 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 POP4O95707 220 aaKnown RBP14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 IL7RP16871 459 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 OR1D2P34982 312 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 CHRNA4P43681 627 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 SYT16Q17RD7 645 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 CRB2Q5IJ48 1285 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 ADGRG6Q86SQ4 1221 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 OR7D4Q8NG98 312 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TMEM80Q96HE8 168 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 SCGB3A2Q96PL1 93 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 MIR1-1HGQ9H1L0 117 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 FLRT1Q9NZU1 646 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 BCAS2O75934 225 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 CLCNKBP51801 687 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 RFTN1Q14699 578 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 NCBP2-AS2Q69YL0 99 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 RAB12Q6IQ22 244 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 GALNT7Q86SF2 657 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 PTPN18Q99952 460 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 ZNF350Q9GZX5 532 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TREM1Q9NP99 234 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 P2RX2Q9UBL9 471 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 J3QRK9 145 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 APLP1P51693 650 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 BTN3A2P78410 334 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 DSC3Q14574 896 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TMEM220Q6QAJ8 160 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 SAMD14Q8IZD0 417 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 ZNF420Q8TAQ5 688 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 FBXL8Q96CD0 374 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 NXPE2Q96DL1 559 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 TUBA1CQ9BQE3 449 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 MTMR10Q9NXD2 777 aa14.23□□□□□ -0.13
CSNK1D-217ENST00000581241 NFAT5O94916 1531 aa14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 PMM2O15305 246 aa14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 VIPP01282 170 aa14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 APODP05090 189 aa14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 MAP3K8P41279 467 aa14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 MAGEA12P43365 314 aa14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 AVPR1BP47901 424 aa14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 RPL6Q02878 288 aaKnown RBP14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 COL9A3Q14050 684 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 C6orf183Q5T699 404 aa14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 PRPF38BQ5VTL8 546 aaKnown RBP14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 LRRC70Q7Z2Q7 622 aa14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 LINC00471Q8N535 108 aa14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 NATD1Q8N6N6 113 aa14.22□□□□□ -0.13
CSNK1D-217ENST00000581241 ATP6V1C2Q8NEY4 427 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms