RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 PCGF1Q9BSM1 259 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 POLR3CQ9BUI4 534 aaPredicted RBP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 WNT5BQ9H1J7 359 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 MAGIXQ9H6Y5 334 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 GORASP2Q9H8Y8 452 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 LMAN1LQ9HAT1 526 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 PNPLA3Q9NST1 481 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 FAM212BQ9NTI7 297 aaPredicted RBP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 DDX18Q9NVP1 670 aaKnown RBP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 ASNSD1Q9NWL6 643 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 P4HTMQ9NXG6 502 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 EHD3Q9NZN3 535 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 SEMA5BQ9P283 1151 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 ATP6V1HQ9UI12 483 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 RCOR1Q9UKL0 485 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 EXOC6BQ9Y2D4 811 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 MRPS7Q9Y2R9 242 aaKnown RBP3.04□□□□□ -1.92
KPNB1-208ENST00000580019 UBR1Q8IWV7 1749 aa3.04□□□□□ -1.92
KPNB1-208ENST00000580019 ARHGAP35Q9NRY4 1499 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 NCAPD2Q15021 1401 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 NCOA3Q9Y6Q9 1424 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 RGPD1P0DJD0 1748 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 A0A096LPK6 155 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ARPC4-TTLL3A0A0A6YYG9 625 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 KANSL1LA0AUZ9 987 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 XKRY2A2RUG3 117 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 FAM149AA5PLN7 773 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 TRIM49BA6NDI0 452 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 H0Y8G0 127 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 L7N2F9 121 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 CXCL11O14625 94 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 NDUFS4O43181 175 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 NEMFO60524 1076 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ATG13O75143 517 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 MTX2O75431 263 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 RHOXF2BP0C7M4 288 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 DANCRP0C864 163 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ETFAP13804 333 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ZNF18P17022 549 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 HNRNPA2B1P22626 353 aaKnown RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 SSR1P43307 286 aaKnown RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 GPR12P47775 334 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 NPBWR1P48145 328 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 VAV2P52735 878 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 MTTPP55157 894 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 SRP54P61011 504 aaKnown RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 POLR2LP62875 67 aaKnown RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 PPP2R2BQ00005 443 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 SLC18A2Q05940 514 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 IL24Q13007 206 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 SPP2Q13103 211 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 NR1D2Q14995 579 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ZMYND11Q15326 602 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 KCTD21Q4G0X4 260 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 SGO1Q5FBB7 561 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ARHGAP17Q68EM7 881 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 KCTD11Q693B1 232 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 PM20D1Q6GTS8 502 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 LRRC8EQ6NSJ5 796 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 SLC18B1Q6NT16 456 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 KIRREL2Q6UWL6 708 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 QSOX2Q6ZRP7 698 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 Q6ZWC4 215 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ADAMTSL2Q86TH1 951 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ZNF573Q86YE8 665 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 TMC8Q8IU68 726 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 UEVLDQ8IX04 471 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 IQCF2Q8IXL9 164 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 LRRC43Q8N309 656 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 PAQR4Q8N4S7 273 aaPredicted RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ZBTB2Q8N680 514 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 EIF1ADQ8N9N8 165 aaKnown RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 FAM47BQ8NA70 645 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 CLEC1AQ8NC01 280 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 TMEM185AQ8NFB2 350 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 GJC3Q8NFK1 279 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 BEST2Q8NFU1 509 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ABHD11Q8NFV4 315 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 OR13C2Q8NGS9 318 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 RNASE8Q8TDE3 154 aaKnown RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ELP5Q8TE02 316 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 HDAC7Q8WUI4 952 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 FIG4Q92562 907 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 NR4A3Q92570 626 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 CELF1Q92879 486 aaKnown RBP3.03□□□□□ -1.92
KPNB1-208ENST00000580019 NACC2Q96BF6 587 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 RNF183Q96D59 192 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 CCDC51Q96ER9 411 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 DTD2Q96FN9 168 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 EGLN2Q96KS0 407 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 LYZL4Q96KX0 146 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ZNF570Q96NI8 536 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 MUS81Q96NY9 551 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 PANX3Q96QZ0 392 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ZNF347Q96SE7 839 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ACOX2Q99424 681 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 ZBTB18Q99592 522 aa3.03□□□□□ -1.92
KPNB1-208ENST00000580019 RHOXF2Q9BQY4 288 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms