RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 NDRG3Q9UGV2 375 aa5.67□□□□□ -1.5
CCDC178-209ENST00000579947 FBXO2Q9UK22 296 aaPredicted RBP5.67□□□□□ -1.5
CCDC178-209ENST00000579947 TRAF3IP3Q9Y228 551 aa5.67□□□□□ -1.5
CCDC178-209ENST00000579947 PCDHGB3Q9Y5G1 929 aa5.67□□□□□ -1.5
CCDC178-209ENST00000579947 PEX1O43933 1283 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 MC3RP41968 323 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 WLSQ5T9L3 541 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 PDPK2PQ6A1A2 396 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 RGS9BPQ6ZS82 235 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 CAND1Q86VP6 1230 aaKnown RBP5.66□□□□□ -1.5
CCDC178-209ENST00000579947 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.66□□□□□ -1.5
CCDC178-209ENST00000579947 KAT2AQ92830 837 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 PSKH2Q96QS6 385 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 NUDCD1Q96RS6 583 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 SRMSQ9H3Y6 488 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 LRRC19Q9H756 370 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 KCNK13Q9HB14 408 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 C14orf105Q9NVL8 296 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 EURLQ9NYK6 297 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 ACTR10Q9NZ32 417 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 SLC25A14O95258 325 aaPredicted RBP5.66□□□□□ -1.5
CCDC178-209ENST00000579947 TIMP3P35625 211 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 PSMC2P35998 433 aaKnown RBP5.66□□□□□ -1.5
CCDC178-209ENST00000579947 RFC3P40938 356 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 OR1D4P47884 311 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 SPINT3P49223 89 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 NR0B1P51843 470 aaKnown RBP5.66□□□□□ -1.5
CCDC178-209ENST00000579947 SNX16P57768 344 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 CCDC38Q502W7 563 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 RALGPS1Q5JS13 557 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 ARMC12Q5T9G4 340 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 FAM131BQ86XD5 332 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 ZNF611Q8N823 705 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 C1orf131Q8NDD1 294 aaKnown RBP5.66□□□□□ -1.5
CCDC178-209ENST00000579947 ACVR1CQ8NER5 493 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 SPDYE1Q8NFV5 336 aaPredicted RBP5.66□□□□□ -1.5
CCDC178-209ENST00000579947 TNIP2Q8NFZ5 429 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 ZNF304Q9HCX3 659 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 ARFGAP3Q9NP61 516 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 INTUQ9ULD6 942 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 PSMD13Q9UNM6 376 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 CNTN6Q9UQ52 1028 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 COLEC10Q9Y6Z7 277 aa5.66□□□□□ -1.5
CCDC178-209ENST00000579947 PVALEFA0A1B0GWK0 134 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 SLC35F4A4IF30 521 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 IL18BPO95998 194 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 TRHRP34981 398 aaPredicted RBP5.65□□□□□ -1.5
CCDC178-209ENST00000579947 PCYT1AP49585 367 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 GZMKP49863 264 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 TAZQ16635 292 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 FAM83HQ6ZRV2 1179 aaPredicted RBP5.65□□□□□ -1.5
CCDC178-209ENST00000579947 TRILQ7L0X0 811 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 HOOK3Q86VS8 718 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 WDTC1Q8N5D0 677 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 SLC5A8Q8N695 610 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 AMER2Q8N7J2 671 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 M1APQ8TC57 530 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 GLYATL1Q969I3 302 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 SPATA32Q96LK8 384 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 HS3ST6Q96QI5 342 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 NUP85Q9BW27 656 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 PHACTR1Q9C0D0 580 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 BARX1Q9HBU1 254 aaPredicted RBP5.65□□□□□ -1.5
CCDC178-209ENST00000579947 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.65□□□□□ -1.5
CCDC178-209ENST00000579947 PKD2L2Q9NZM6 624 aa5.65□□□□□ -1.5
CCDC178-209ENST00000579947 DNMT3AQ9Y6K1 912 aaPredicted RBP5.65□□□□□ -1.5
CCDC178-209ENST00000579947 A0A0J9YYE9 177 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 FITM1A5D6W6 292 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 ELOA3DA6NLF2 546 aaPredicted RBP5.65□□□□□ -1.51
CCDC178-209ENST00000579947 FZD6O60353 706 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 ADAM11O75078 769 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 TRBC1P01850 177 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 HSPA9P38646 679 aaKnown RBP5.65□□□□□ -1.51
CCDC178-209ENST00000579947 ZNF136P52737 540 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 ELOA3BQ3SY89 546 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 ZNF468Q5VIY5 522 aaPredicted RBP5.65□□□□□ -1.51
CCDC178-209ENST00000579947 MCTP1Q6DN14 999 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 PRMT9Q6P2P2 845 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 LAPTM4BQ86VI4 370 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 AMZ2Q86W34 360 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 PRSS58Q8IYP2 241 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 FBXW8Q8N3Y1 598 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 TTC29Q8NA56 475 aaPredicted RBP5.65□□□□□ -1.51
CCDC178-209ENST00000579947 ELOA3Q8NG57 546 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 LCN9Q8WX39 176 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 SARAFQ96BY9 339 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 FAF2Q96CS3 445 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 RHNO1Q9BSD3 238 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 RBM24Q9BX46 236 aaKnown RBP5.65□□□□□ -1.51
CCDC178-209ENST00000579947 WWP1Q9H0M0 922 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 TFB2MQ9H5Q4 396 aaKnown RBP5.65□□□□□ -1.51
CCDC178-209ENST00000579947 METTL14Q9HCE5 456 aaKnown RBP5.65□□□□□ -1.51
CCDC178-209ENST00000579947 MMP25Q9NPA2 562 aa5.65□□□□□ -1.51
CCDC178-209ENST00000579947 C2orf81A6NN90 581 aa5.64□□□□□ -1.51
CCDC178-209ENST00000579947 TRIM77I1YAP6 450 aa5.64□□□□□ -1.51
CCDC178-209ENST00000579947 ITGA10O75578 1167 aa5.64□□□□□ -1.51
CCDC178-209ENST00000579947 HEXBP07686 556 aa5.64□□□□□ -1.51
CCDC178-209ENST00000579947 HLCSP50747 726 aa5.64□□□□□ -1.51
CCDC178-209ENST00000579947 MLF1P58340 268 aa5.64□□□□□ -1.51
CCDC178-209ENST00000579947 GRM7Q14831 915 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms