RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TRAPPC5Q8IUR0 188 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 IFT20Q8IY31 132 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ARL14Q8N4G2 192 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 MREGQ8N565 214 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 EID2Q8N6I1 236 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ARL10Q8N8L6 244 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 DEFB124Q8NES8 71 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 OR6P1Q8NGX9 317 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 DENND1AQ8TEH3 1009 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 FBF1Q8TES7 1133 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 PYROXD1Q8WU10 500 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 HEXDCQ8WVB3 486 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 DCAKDQ8WVC6 231 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ANKRD49Q8WVL7 239 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC44A1Q8WWI5 657 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.69□□□□□ -1.824e-8■■■■■ 36.3
SMARCE1-215ENST00000578995 DLG3Q92796 817 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 KCNJ9Q92806 393 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 CAVIN3Q969G5 261 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 FAM122AQ96E09 287 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 VPS39Q96JC1 886 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 ZNF514Q96K75 400 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 UBXN10Q96LJ8 280 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 NDNQ99608 321 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 GPR22Q99680 433 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 RBBP8Q99708 897 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 CCM2Q9BSQ5 444 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 FAM167BQ9BTA0 163 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 PARD6BQ9BYG5 372 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 GSDMCQ9BYG8 508 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 WWP1Q9H0M0 922 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 RHOJQ9H4E5 214 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 SARS2Q9NP81 518 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 PRDM8Q9NQV8 689 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 KLC4Q9NSK0 619 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 SAMD15Q9P1V8 674 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 KLHL42Q9P2K6 505 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 CRYL1Q9Y2S2 319 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 MTO1Q9Y2Z2 717 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 PCDHB1Q9Y5F3 818 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 NFS1Q9Y697 457 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 RNF215Q9Y6U7 377 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 AHCTF1Q8WYP5 2266 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 MN1Q10571 1320 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 CELSR3Q9NYQ7 3312 aa3.69□□□□□ -1.82
SMARCE1-215ENST00000578995 KMT2BQ9UMN6 2715 aaPredicted RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 IGHV1OR21-1A0A087WYE8 117 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 KIR2DS5A0A0G2JLQ3 304 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 A0A0G2JNG1 304 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SPAARA0A1B0GVQ0 90 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 A0A1W2PPV9 198 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 FAM221BA6H8Z2 402 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 KLHL33A6NCF5 533 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 OR14I1A6ND48 311 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 LILRA5A6NI73 299 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 ARHGEF33A8MVX0 844 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 B4DGG1 531 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 H3BMM5 538 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 GFYI3L273 518 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 KIR2DS3K7RE56 304 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 QSOX1O00391 747 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 LIN7AO14910 233 aaPredicted RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 TNFSF14O43557 240 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 NUDT21O43809 227 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PSIP1O75475 530 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 TCEA3O75764 348 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 KCNK5O95279 499 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 ACSL3O95573 720 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 TOP3BO95985 862 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 FTH1P02794 183 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 ALDOAP04075 364 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CAPNS1P04632 268 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 GP1BAP07359 652 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 ANXA6P08133 673 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 NUDT17P0C025 328 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SBK3P0C264 359 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC35E2BP0CK96 405 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CEACAM1P13688 526 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PNLIPP16233 465 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 ZNF37AP17032 561 aaPredicted RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CKMT2P17540 419 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 ITGB6P18564 788 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PAMP19021 973 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 RPL10P27635 214 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CD1CP29017 333 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PBLDP30039 288 aaPredicted RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 FMO4P31512 558 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 HSD17B3P37058 310 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 GP5P40197 560 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SKIV2L2P42285 1042 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CD151P48509 253 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PMS2P54278 862 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CSE1LP55060 971 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 EIF3BP55884 814 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 CLDN6P56747 220 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 PPP1CAP62136 330 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 ILF3Q12906 894 aaKnown RBP eCLIP3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 NAB1Q13506 487 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 GPR18Q14330 331 aa3.68□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC29A2Q14542 456 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms