RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CLDN8P56748 225 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 CDK3Q00526 305 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 RHDQ02161 417 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 MESP2Q0VG99 397 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 HTR4Q13639 388 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 MAPKAPK3Q16644 382 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 AGBL4Q5VU57 503 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 MED27Q6P2C8 311 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 USP30Q70CQ3 517 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 HEATR4Q86WZ0 1026 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 DCUN1D3Q8IWE4 304 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 KRT78Q8N1N4 520 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 DCBLD1Q8N8Z6 715 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 PROKR1Q8TCW9 393 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 NAT14Q8WUY8 206 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 PYDC1Q8WXC3 89 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 DUS3LQ96G46 650 aaKnown RBP10.81□□□□□ -0.68
SKA2-204ENST00000578519 ZNF184Q99676 751 aaPredicted RBP10.81□□□□□ -0.68
SKA2-204ENST00000578519 TEX101Q9BY14 249 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 SPATA7Q9P0W8 599 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 MAP10Q9P2G4 905 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 ABCD2Q9UBJ2 740 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 VPS29Q9UBQ0 182 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 GIMAP2Q9UG22 337 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 FZD4Q9ULV1 537 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 CCL27Q9Y4X3 112 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 DNAH12Q6ZR08 3092 aa10.81□□□□□ -0.68
SKA2-204ENST00000578519 DOCK6Q96HP0 2047 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 KCNE1BA0A087WTH5 132 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 A0A1W2PP55 124 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 K7EQS6 105 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 ACOT8O14734 319 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 CASQ2O14958 399 aaPredicted RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 SNPHO15079 494 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 PLRG1O43660 514 aaKnown RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 LILRB5O75023 590 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 ERN1O75460 977 aaKnown RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 SOD1P00441 154 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 SLC35G4P0C7Q5 338 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 C1GALT1C1LP0DN25 315 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 FCGR1AP12314 374 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 HOXB2P14652 356 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 PRPS1L1P21108 318 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 SERPINB1P30740 379 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 SLC7A1P30825 629 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 CTHP32929 405 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 DRD3P35462 400 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 HNRNPFP52597 415 aaKnown RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 GTF2A1P52655 376 aaPredicted RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 SEC13P55735 322 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 SRSF11Q05519 484 aaKnown RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 TLR1Q15399 786 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 CYP2A13Q16696 494 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 WSCD2Q2TBF2 565 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 RFTN2Q52LD8 501 aaPredicted RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 SPIN4Q56A73 249 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 MTX3Q5HYI7 312 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 HABP4Q5JVS0 413 aaKnown RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 MBOAT1Q6ZNC8 495 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 PDZD3Q86UT5 571 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 PQLC1Q8N2U9 271 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 LIX1Q8N485 282 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 OXR1Q8N573 874 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 ICA1LQ8NDH6 482 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 VPS37AQ8NEZ2 397 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 ADCY4Q8NFM4 1077 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 OR8J3Q8NGG0 315 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 OR14C36Q8NHC7 312 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 SLC13A3Q8WWT9 602 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 MTFMTQ96DP5 389 aaKnown RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 SIPA1Q96FS4 1042 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 LRCH3Q96II8 777 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 ITCHQ96J02 903 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 MSLNLQ96KJ4 702 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 KCTD14Q9BQ13 255 aaPredicted RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 TIMM29Q9BSF4 260 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 RAB11FIP5Q9BXF6 653 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 C1QTNF2Q9BXJ5 285 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 PITHD1Q9GZP4 211 aaPredicted RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 TRIT1Q9H3H1 467 aaKnown RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 YY1AP1Q9H869 796 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 IL1RL2Q9HB29 575 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 SGK2Q9HBY8 427 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 CCDC177Q9NQR7 707 aaPredicted RBP10.8□□□□□ -0.68
SKA2-204ENST00000578519 C8orf4Q9NR00 106 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 AHSPQ9NZD4 102 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 ACTR3BQ9P1U1 418 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 ASF1AQ9Y294 204 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 LRCH1Q9Y2L9 728 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 AP4S1Q9Y587 144 aa10.8□□□□□ -0.68
SKA2-204ENST00000578519 PLXNA2O75051 1894 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TBC1D3DA0A087WVF3 549 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TBC1D3IA0A087WXS9 549 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TBC1D3EA0A087X179 549 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TBC1D3KA0A087X1G2 549 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TBC1D3FA6NER0 549 aaPredicted RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 TBC1D3LB9A6J9 549 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 FOXE1O00358 373 aaPredicted RBP10.79□□□□□ -0.68
SKA2-204ENST00000578519 PLK4O00444 970 aa10.79□□□□□ -0.68
SKA2-204ENST00000578519 TOR1BO14657 336 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms