RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 MATN2O00339 956 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 TOX3O15405 576 aaPredicted RBP20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 ZBTB11O95625 1053 aaPredicted RBP20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 C8GP07360 202 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 SLC35E2BP0CK96 405 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 STMN1P16949 149 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 MAP4P27816 1152 aaKnown RBP20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 TSPAN7P41732 249 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 PNLIPRP1P54315 467 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 SRSF6Q13247 344 aaKnown RBP20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 TGIF1Q15583 401 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 TSNQ15631 228 aaKnown RBP20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 PRAMEF17Q5VTA0 474 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 IGF2-ASQ6U949 168 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 PROSER1Q86XN7 944 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 C19orf47Q8N9M1 422 aaKnown RBP20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 FBXO15Q8NCQ5 510 aaPredicted RBP20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 MAGEC3Q8TD91 643 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 DCAKDQ8WVC6 231 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 RAB11FIP5Q9BXF6 653 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 SLC12A9Q9BXP2 914 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 STOX2Q9P2F5 926 aaPredicted RBP20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 DKK4Q9UBT3 224 aa20.93■□□□□ 0.94
CDC42EP4-203ENST00000578516 ZBTB14O43829 449 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 KDM1AO60341 852 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 GUCA1CO95843 209 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 OAS2P29728 719 aaKnown RBP20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 MLLT3P42568 568 aaPredicted RBP20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 ARL4DP49703 201 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 RAB10P61026 200 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 SP140Q13342 867 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 TUBB3Q13509 450 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 CSHL1Q14406 222 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 KIR2DS3Q14952 304 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 C18orf21Q32NC0 220 aaPredicted RBP20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 LRRC8EQ6NSJ5 796 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 CDHR3Q6ZTQ4 885 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 TRMT10CQ7L0Y3 403 aaKnown RBP20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 LRRC56Q8IYG6 542 aaPredicted RBP20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 SYTL1Q8IYJ3 562 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 D2HGDHQ8N465 521 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 KDF1Q8NAX2 398 aaPredicted RBP20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 PTERQ96BW5 349 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 TAAR9Q96RI9 348 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 ATG10Q9H0Y0 220 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 SLC6A20Q9NP91 592 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 SNX15Q9NRS6 342 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 THSD1Q9NS62 852 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 TAC3Q9UHF0 121 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 BTRCQ9Y297 605 aa20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 URB1O60287 2271 aaKnown RBP20.92■□□□□ 0.94
CDC42EP4-203ENST00000578516 EXOC1LA0A1B0GW35 172 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 SHBGP04278 402 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 INHBAP08476 426 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 ABHD2P08910 425 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 CCDC166P0CW27 439 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 CYP2A7P20853 494 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 TBPL1P62380 186 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 HSD11B2P80365 405 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 SLC29A2Q14542 456 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 OR4D1Q15615 310 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 SF1Q15637 639 aaKnown RBP20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 PPP1R3AQ16821 1122 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 ST3GAL2Q16842 350 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 SLC5A12Q1EHB4 618 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 FCRL6Q6DN72 434 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 RAPH1Q70E73 1250 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 NKAPQ8N5F7 415 aaKnown RBP20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 OR2A1Q8NGT9 310 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 HMGCLL1Q8TB92 370 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 KCTD4Q8WVF5 259 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 UBLCP1Q8WVY7 318 aaPredicted RBP20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 ALKBH8Q96BT7 664 aaKnown RBP20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 TSPAN17Q96FV3 270 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 ZNF578Q96N58 590 aaPredicted RBP20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 PARVBQ9HBI1 364 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 POPDC3Q9HBV1 291 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 WDR70Q9NW82 654 aa20.91■□□□□ 0.94
CDC42EP4-203ENST00000578516 E7ENX8 843 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 ALDOAP04075 364 aaKnown RBP20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 CD1DP15813 335 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 GRIA3P42263 894 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 TAP2Q03519 686 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 FBXO48Q5FWF7 155 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 KMT5CQ86Y97 462 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 LSMEM2Q8N112 164 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 RAB42Q8N4Z0 105 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 OR2L3Q8NG85 312 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 SNIP1Q8TAD8 396 aaKnown RBP20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 FGF11Q92914 225 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 EXT2Q93063 718 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 PDLIM5Q96HC4 596 aaKnown RBP20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 FCRL4Q96PJ5 515 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 SYNPO2LQ9H987 977 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 SYTL2Q9HCH5 934 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 FGF21Q9NSA1 209 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 IGSF5Q9NSI5 407 aa20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 CUEDC1Q9NWM3 386 aaPredicted RBP20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.9■□□□□ 0.94
CDC42EP4-203ENST00000578516 CTNNAL1Q9UBT7 734 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms