RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	TUBB4A	P04350	444 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	F7	P08709	466 aa	Predicted RBP	13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	MPC1L	P0DKB6	136 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ERG	P11308	486 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	BDKRB1	P46663	353 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CARS	P49589	748 aa	Known RBP	13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CKAP4	Q07065	602 aa	Known RBP	13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	C2orf54	Q08AI8	447 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PDIA2	Q13087	525 aa	Known RBP	13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CALCOCO2	Q13137	446 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ARHGAP19	Q14CB8	494 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ZIC1	Q15915	447 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	LRRC8E	Q6NSJ5	796 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	TRIM73	Q86UV7	250 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	OR9A1P	Q8NGU1	263 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CD200R1	Q8TD46	325 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	DENND1A	Q8TEH3	1009 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ASB11	Q8WXH4	323 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CFAP36	Q96G28	342 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	IL17F	Q96PD4	163 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	GPR21	Q99679	349 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	KLHL25	Q9H0H3	589 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	FAM60A	Q9NP50	221 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PPAN	Q9NQ55	473 aa	Known RBP	13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	IGSF5	Q9NSI5	407 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	INTS7	Q9NVH2	962 aa	Known RBP	13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	TAS2R13	Q9NYV9	303 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	MOCS1	Q9NZB8	636 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CDC23	Q9UJX2	597 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	KCND3	Q9UK17	655 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	CROT	Q9UKG9	612 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	RUVBL2	Q9Y230	463 aa	Known RBP	13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	UTP11	Q9Y3A2	253 aa	Known RBP	13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	PCDHGA6	Q9Y5G7	932 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	KLK4	Q9Y5K2	254 aa		13.15	□□□□□ -0.3
CSNK1D-208	ENST00000578501	ARHGEF33	A8MVX0	844 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	TARM1	B6A8C7	271 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	EIF3H	O15372	352 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	RECK	O95980	971 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	DLST	P36957	453 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	GABRA4	P48169	554 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	ITGA1	P56199	1179 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.14	□□□□□ -0.31	4e-11	■■■■□ 21.7
CSNK1D-208	ENST00000578501	MC1R	Q01726	317 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	CAV1	Q03135	178 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	UBAP2L	Q14157	1087 aa	Known RBP	13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	LINC00303	Q3SY05	128 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	CCSMST1	Q4G0I0	132 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	TRMT10B	Q6PF06	316 aa	Known RBP	13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	CYHR1	Q6ZMK1	362 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	DNAJC22	Q8N4W6	341 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	LMNTD1	Q8N9Z9	388 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	FBXO36	Q8NEA4	188 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	OR1L3	Q8NH93	324 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	ZUFSP	Q96AP4	578 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	C16orf45	Q96MC5	204 aa	Predicted RBP	13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	CATSPER2	Q96P56	530 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	GPR87	Q9BY21	358 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	PHACTR1	Q9C0D0	580 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	RAB17	Q9H0T7	212 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	ENAM	Q9NRM1	1142 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	GRHL1	Q9NZI5	618 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	AP1M2	Q9Y6Q5	423 aa		13.14	□□□□□ -0.31
CSNK1D-208	ENST00000578501	ZNF839	A8K0R7	811 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501		E7EQ34	232 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501		H3BMH7	237 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	ZBTB14	O43829	449 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	KLK3	P07288	261 aa	Predicted RBP	13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	HBQ1	P09105	142 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	CYP2A7	P20853	494 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	F8A1	P23610	371 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	OAS2	P29728	719 aa	Known RBP	13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	RORA	P35398	523 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	MRPS25	P82663	173 aa	Known RBP	13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	MGAT5	Q09328	741 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	ILF2	Q12905	390 aa	Known RBP	13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	CUL1	Q13616	776 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	SF1	Q15637	639 aa	Known RBP	13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	CYS1	Q717R9	158 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	ANKMY2	Q8IV38	441 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	CPNE9	Q8IYJ1	553 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	GPR135	Q8IZ08	494 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	ZBED8	Q8IZ13	594 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	DSEL	Q8IZU8	1212 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	SLC38A9	Q8NBW4	561 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	STARD8	Q92502	1023 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	N4BP2L2	Q92802	583 aa	Predicted RBP	13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	NDN	Q99608	321 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	DPH2	Q9BQC3	489 aa	Predicted RBP	13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	CIDEB	Q9UHD4	219 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	TRMT6	Q9UJA5	497 aa	Known RBP	13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	PLCL2	Q9UPR0	1127 aa		13.13	□□□□□ -0.31
CSNK1D-208	ENST00000578501	PIEZO2	Q9H5I5	2752 aa		13.12	□□□□□ -0.31
CSNK1D-208	ENST00000578501		A0A1W2PPV9	198 aa		13.12	□□□□□ -0.31
CSNK1D-208	ENST00000578501	MEN1	O00255	615 aa		13.12	□□□□□ -0.31

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