RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 GRK2P25098 689 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 HSPA7P48741 367 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 THOP1P52888 689 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 NFKB2Q00653 900 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 GSTM4Q03013 218 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 ASPHQ12797 758 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 SETDB1Q15047 1291 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 ALG11Q2TAA5 492 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 ZNF542PQ5EBM4 170 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 ARL13AQ5H913 290 aaPredicted RBP9.79□□□□□ -0.84
CRLF3-202ENST00000577725 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.79□□□□□ -0.84
CRLF3-202ENST00000577725 FOXR1Q6PIV2 292 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 NEK10Q6ZWH5 1172 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 SPATA21Q7Z572 469 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 ABI3BPQ7Z7G0 1075 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 HID1Q8IV36 788 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 RASGRP3Q8IV61 690 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 SLC22A9Q8IVM8 553 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 SLC22A18ASQ8N1D0 253 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 ZNF781Q8N8C0 355 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 ZNF248Q8NDW4 579 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 PHC3Q8NDX5 983 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 CCL4L1Q8NHW4 92 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 SNRNP27Q8WVK2 155 aaKnown RBP9.79□□□□□ -0.84
CRLF3-202ENST00000577725 ASB11Q8WXH4 323 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 HSPA12BQ96MM6 686 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 PSMG3-AS1Q96PY0 264 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 OR2M4Q96R27 311 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 TMEM79Q9BSE2 394 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 DRC3Q9H069 523 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 TCEAL2Q9H3H9 227 aaPredicted RBP9.79□□□□□ -0.84
CRLF3-202ENST00000577725 GAREM1Q9H706 876 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 THAP1Q9NVV9 213 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 DCTN4Q9UJW0 460 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 PLAGL1Q9UM63 463 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 DMTF1Q9Y222 760 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 FIS1Q9Y3D6 152 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 KNL1Q8NG31 2342 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 DOPEY2Q9Y3R5 2298 aa9.79□□□□□ -0.84
CRLF3-202ENST00000577725 C17orf113A0A1B0GUU1 675 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 TMEM233B4DJY2 109 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 GFYI3L273 518 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 PPP6CO00743 305 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 KLK8O60259 260 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 BRINP1O60477 761 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 NPHS1O60500 1241 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 MATN4O95460 622 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 RPS17P08708 135 aaKnown RBP9.78□□□□□ -0.84
CRLF3-202ENST00000577725 THEGLP0DJG4 465 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 VCLP18206 1134 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 CYP2A7P20853 494 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 AK4P27144 223 aaPredicted RBP9.78□□□□□ -0.84
CRLF3-202ENST00000577725 RPL10P27635 214 aaKnown RBP9.78□□□□□ -0.84
CRLF3-202ENST00000577725 GDF5P43026 501 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 RABIFP47224 123 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 RPIAP49247 311 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 CLCNKAP51800 687 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 ALDH18A1P54886 795 aaKnown RBP9.78□□□□□ -0.84
CRLF3-202ENST00000577725 SRP54P61011 504 aaKnown RBP9.78□□□□□ -0.84
CRLF3-202ENST00000577725 HERVK_113P63132 956 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 EIF2B5Q13144 721 aaKnown RBP9.78□□□□□ -0.84
CRLF3-202ENST00000577725 SUZ12Q15022 739 aaKnown RBP9.78□□□□□ -0.84
CRLF3-202ENST00000577725 RBBP7Q16576 425 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 TBC1D25Q3MII6 688 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 IL27RAQ6UWB1 636 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 FRMD7Q6ZUT3 714 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 CRLF3Q8IUI8 442 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 PDPRQ8NCN5 879 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 TRPC4APQ8TEL6 797 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 PPP4R1Q8TF05 950 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 ZNF483Q8TF39 744 aaPredicted RBP9.78□□□□□ -0.84
CRLF3-202ENST00000577725 RHBDF1Q96CC6 855 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 CCDC126Q96EE4 140 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 L3HYPDHQ96EM0 354 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 SCARF2Q96GP6 870 aaPredicted RBP9.78□□□□□ -0.84
CRLF3-202ENST00000577725 SEC16BQ96JE7 1060 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 C7orf26Q96N11 449 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 PKP4Q99569 1192 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 NRTNQ99748 197 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 TIMM29Q9BSF4 260 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 SLC12A9Q9BXP2 914 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 ERVK-6Q9BXR3 956 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 OR52A5Q9H2C5 316 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 RMI1Q9H9A7 625 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 PARVBQ9HBI1 364 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 SEMA4BQ9NPR2 832 aaPredicted RBP9.78□□□□□ -0.84
CRLF3-202ENST00000577725 ARL15Q9NXU5 204 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 ZDHHC2Q9UIJ5 367 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 PTBP2Q9UKA9 531 aaKnown RBP9.78□□□□□ -0.84
CRLF3-202ENST00000577725 PCTPQ9UKL6 214 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 WDR37Q9Y2I8 494 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 ST14Q9Y5Y6 855 aa9.78□□□□□ -0.84
CRLF3-202ENST00000577725 PRAMEF33A0A0G2JMD5 474 aa9.77□□□□□ -0.85
CRLF3-202ENST00000577725 A0A1B0GTL3 188 aa9.77□□□□□ -0.85
CRLF3-202ENST00000577725 A0A1W2PR77 199 aa9.77□□□□□ -0.85
CRLF3-202ENST00000577725 CCDC189A1A4V9 331 aa9.77□□□□□ -0.85
CRLF3-202ENST00000577725 PABPN1LA6NDY0 278 aaKnown RBP9.77□□□□□ -0.85
CRLF3-202ENST00000577725 GPR89AB7ZAQ6 455 aa9.77□□□□□ -0.85
CRLF3-202ENST00000577725 STX16-NPEPL1H3BU86 382 aa9.77□□□□□ -0.85
CRLF3-202ENST00000577725 UBFD1O14562 309 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms