RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CDKL3Q8IVW4 592 aaPredicted RBP12.78□□□□□ -0.36
COPS3-214ENST00000577246 TMEM151BQ8IW70 566 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 RCOR2Q8IZ40 523 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 DNAJC1Q96KC8 554 aaKnown RBP12.78□□□□□ -0.36
COPS3-214ENST00000577246 TAAR6Q96RI8 345 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 TTC1Q99614 292 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 TBL1YQ9BQ87 522 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 GORASP1Q9BQQ3 440 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 ARNT2Q9HBZ2 717 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 ZNF304Q9HCX3 659 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 NLE1Q9NVX2 485 aaPredicted RBP12.78□□□□□ -0.36
COPS3-214ENST00000577246 PTGFRNQ9P2B2 879 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 SEC16AO15027 2179 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 F8P00451 2351 aa12.78□□□□□ -0.36
COPS3-214ENST00000577246 SLC5A10A0PJK1 596 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 FITM1A5D6W6 292 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 APOC4-APOC2K7ER74 178 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 CCL22O00626 93 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 KCNN4O15554 427 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 WFS1O76024 890 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 BMP10O95393 424 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 MLYCDO95822 493 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 APOC2P02655 101 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 SERPINA7P05543 415 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 ZGLP1P0C6A0 271 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 PRR35P0CG20 571 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 ESRRAP11474 423 aaPredicted RBP12.77□□□□□ -0.37
COPS3-214ENST00000577246 PSMB4P28070 264 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 PEBP1P30086 187 aaKnown RBP12.77□□□□□ -0.37
COPS3-214ENST00000577246 SOX11P35716 441 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 OR1D4P47884 311 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 CDKN1CP49918 316 aaPredicted RBP12.77□□□□□ -0.37
COPS3-214ENST00000577246 KLC1Q07866 573 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 MSLNQ13421 630 aaPredicted RBP12.77□□□□□ -0.37
COPS3-214ENST00000577246 TRIM14Q14142 442 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 DBN1Q16643 649 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 LONRF1Q17RB8 773 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 ANKRD20A2Q5SQ80 823 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 ANKRD20A1Q5TYW2 823 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 ANKRD20A3Q5VUR7 823 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 SPNS3Q6ZMD2 512 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 KATNAL2Q8IYT4 538 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 OR8K1Q8NGG5 319 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 STT3BQ8TCJ2 826 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.77□□□□□ -0.37
COPS3-214ENST00000577246 ZUFSPQ96AP4 578 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 CCDC42Q96M95 316 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 ZNF285Q96NJ3 590 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 TSSK1BQ9BXA7 367 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 RAB11FIP5Q9BXF6 653 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 RNF32Q9H0A6 362 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 C3orf18Q9UK00 162 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 INTUQ9ULD6 942 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 PLAGL1Q9UM63 463 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 HYOU1Q9Y4L1 999 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 POLQO75417 2590 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 ADGRG4Q8IZF6 3080 aa12.77□□□□□ -0.37
COPS3-214ENST00000577246 NUP210LQ5VU65 1888 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 TARM1B6A8C7 271 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 BHMG1C9JSJ3 638 aaPredicted RBP12.76□□□□□ -0.37
COPS3-214ENST00000577246 GOLGA6L19H0YKK7 550 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 PRPF4O43172 522 aaKnown RBP eCLIP12.76□□□□□ -0.37
COPS3-214ENST00000577246 TPM1P09493 284 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 TPBGLP0DKB5 382 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 ICAM2P13598 275 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 CD9P21926 228 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 CTNNA2P26232 953 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 NAA25Q14CX7 972 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 TCEAL1Q15170 157 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 SF1Q15637 639 aaKnown RBP12.76□□□□□ -0.37
COPS3-214ENST00000577246 ATG9BQ674R7 924 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 FIGLAQ6QHK4 219 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 BBS12Q6ZW61 710 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 DCUN1D3Q8IWE4 304 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 FAM20CQ8IXL6 584 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 RAB42Q8N4Z0 105 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 METTL27Q8N6F8 245 aaPredicted RBP12.76□□□□□ -0.37
COPS3-214ENST00000577246 BRIX1Q8TDN6 353 aaKnown RBP12.76□□□□□ -0.37
COPS3-214ENST00000577246 STYXQ8WUJ0 223 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 CHTF18Q8WVB6 975 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 C14orf79Q96F83 325 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 DNAJC7Q99615 494 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 RIC8BQ9NVN3 520 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 PLA2G3Q9NZ20 509 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 TEKT2Q9UIF3 430 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 SH3BGRL2Q9UJC5 107 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 SLC39A10Q9ULF5 831 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 KLHL20Q9Y2M5 609 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 MAU2Q9Y6X3 613 aa12.76□□□□□ -0.37
COPS3-214ENST00000577246 PDZD2O15018 2839 aa12.75□□□□□ -0.37
COPS3-214ENST00000577246 A0A1W2PQ72 361 aa12.75□□□□□ -0.37
COPS3-214ENST00000577246 MACROD2A1Z1Q3 448 aa12.75□□□□□ -0.37
COPS3-214ENST00000577246 HYKKA2RU49 373 aa12.75□□□□□ -0.37
COPS3-214ENST00000577246 SLC19A2O60779 497 aa12.75□□□□□ -0.37
COPS3-214ENST00000577246 ERVK-10P10266 1014 aa12.75□□□□□ -0.37
COPS3-214ENST00000577246 FBLP22087 321 aaKnown RBP12.75□□□□□ -0.37
COPS3-214ENST00000577246 MCM3P25205 808 aa12.75□□□□□ -0.37
COPS3-214ENST00000577246 OLIG2Q13516 323 aa12.75□□□□□ -0.37
COPS3-214ENST00000577246 MUM1Q2TAK8 710 aa12.75□□□□□ -0.37
COPS3-214ENST00000577246 ABHD17BQ5VST6 288 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms