RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 ZGLP1P0C6A0 271 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 PRR35P0CG20 571 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 COX6A1P12074 109 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 ACPPP15309 386 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 CAPN3P20807 821 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 COMTP21964 271 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 NSG1P42857 185 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 CARSP49589 748 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 CSE1LP55060 971 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 PMP22Q01453 160 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 GRM7Q14831 915 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 IQCB1Q15051 598 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 SLC18A3Q16572 532 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 DBN1Q16643 649 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 ASTE1Q2TB18 679 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 TFDP3Q5H9I0 405 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 WASHC2DQ5SRD0 308 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 LRRC38Q5VT99 294 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 DENND5AQ6IQ26 1287 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 MTFR2Q6P444 385 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 FIGLAQ6QHK4 219 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 NCCRP1Q6ZVX7 275 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 NDUFAF7Q7L592 441 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 CDH24Q86UP0 819 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 CEP97Q8IW35 865 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 PIANPQ8IYJ0 282 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 MIEF2Q96C03 454 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 VPS50Q96JG6 964 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 IL17FQ96PD4 163 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 GBA3Q9H227 469 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 ZNF304Q9HCX3 659 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 SMARCAL1Q9NZC9 954 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 ABI3Q9P2A4 366 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 ZC3H7BQ9UGR2 993 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 TINAGQ9UJW2 476 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 C3orf18Q9UK00 162 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 NXT1Q9UKK6 140 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 TRHDEQ9UKU6 1024 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 MRPS2Q9Y399 296 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 NEU2Q9Y3R4 380 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 NAV3Q8IVL0 2385 aa9.66□□□□□ -0.86
NPLOC4-220ENST00000576940 HYKKA2RU49 373 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 GOLGA6L22H0YM25 854 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 FFAR3O14843 346 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 GPR42O15529 346 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 ZNHIT1O43257 154 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 SLC19A2O60779 497 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 WFS1O76024 890 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 USP1O94782 785 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 CLDN14O95500 239 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 CRYABP02511 175 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 GYPCP04921 128 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 TPH1P17752 444 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 CD9P21926 228 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 PSMB4P28070 264 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 UBASH3AP57075 661 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 VSX2P58304 361 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 OCA2Q04671 838 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 TLE4Q04727 773 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 EEF1A2Q05639 463 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 SF1Q15637 639 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 INAQ16352 499 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 FAM214AQ32MH5 1076 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 ZC3H12BQ5HYM0 836 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 TCTE1Q5JU00 501 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 YOD1Q5VVQ6 348 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 FAAH2Q6GMR7 532 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 FRMPD2BQ6IN97 320 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 CCDC50Q8IVM0 306 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 TTC29Q8NA56 475 aaPredicted RBP9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 DNAJB8Q8NHS0 232 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 CDKN2AIPNLQ96HQ2 116 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 ZNF285Q96NJ3 590 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 QKIQ96PU8 341 aaKnown RBP eCLIP9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 SELENOSQ9BQE4 189 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 MENTQ9BUN1 341 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 IL1RAPL1Q9NZN1 696 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 IMPACTQ9P2X3 320 aa9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 AAR2Q9Y312 384 aaKnown RBP9.65□□□□□ -0.86
NPLOC4-220ENST00000576940 LOC105369274A0A096LPK9 316 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 LOC102723532A0A0G2JNH3 316 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 A0A0J9YVX5 310 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 FITM1A5D6W6 292 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 HACD1B0YJ81 288 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 H7C0C1 242 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 NRP2O60462 931 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 CTSVO60911 334 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 AP2A2O94973 939 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 BMP10O95393 424 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 EIF2S1P05198 315 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 SERPINA7P05543 415 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 UQCRHP07919 91 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 GSTM1P09488 218 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 ITGAMP11215 1152 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 PKLRP30613 574 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 SLC1A1P43005 524 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 ATP5OP48047 213 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 ST13P50502 369 aaKnown RBP9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 RAB28P51157 221 aa9.64□□□□□ -0.87
NPLOC4-220ENST00000576940 SMSP52788 366 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms