RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ARHGEF33A8MVX0 844 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 TMEM150CB9EJG8 249 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 K7ENP7 123 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 EFSO43281 561 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 MATN4O95460 622 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 AHSGP02765 367 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 LIFP15018 202 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 MAP4P27816 1152 aaKnown RBP12.8□□□□□ -0.36
RPAIN-216ENST00000575599 KIR2DS3Q14952 304 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.8□□□□□ -0.36
RPAIN-216ENST00000575599 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.8□□□□□ -0.36
RPAIN-216ENST00000575599 BEND6Q5SZJ8 279 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-216ENST00000575599 RBM20Q5T481 1227 aaKnown RBP12.8□□□□□ -0.36
RPAIN-216ENST00000575599 INO80CQ6PI98 192 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-216ENST00000575599 C6orf15Q6UXA7 325 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-216ENST00000575599 HDXQ7Z353 690 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 RELL1Q8IUW5 271 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 TMEM126BQ8IUX1 230 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 ESX1Q8N693 406 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 GPATCH11Q8N954 259 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 OR2L8Q8NGY9 312 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 FLVCR1-AS1Q8TAF5 88 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 INPP5DQ92835 1189 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 KCTD12Q96CX2 325 aaKnown RBP12.8□□□□□ -0.36
RPAIN-216ENST00000575599 ZNF501Q96CX3 271 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-216ENST00000575599 SPRY4Q9C004 299 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 CDC42EP4Q9H3Q1 356 aaKnown RBP12.8□□□□□ -0.36
RPAIN-216ENST00000575599 ZFATQ9P243 1243 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 DHRS7Q9Y394 339 aa12.8□□□□□ -0.36
RPAIN-216ENST00000575599 TK2O00142 265 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 PSIP1O75475 530 aaKnown RBP12.79□□□□□ -0.36
RPAIN-216ENST00000575599 SCRG1O75711 98 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 ACSL3O95573 720 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 CATP04040 527 aaKnown RBP12.79□□□□□ -0.36
RPAIN-216ENST00000575599 NTRK1P04629 796 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 ENO3P13929 434 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-216ENST00000575599 WT1P19544 449 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-216ENST00000575599 MGAT5Q09328 741 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 SLC5A12Q1EHB4 618 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 DEFB110Q30KQ9 67 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 KIAA1614Q5VZ46 1190 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 UGT3A1Q6NUS8 523 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 CDHR3Q6ZTQ4 885 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 NEK10Q6ZWH5 1172 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 PIWIL4Q7Z3Z4 852 aaKnown RBP12.79□□□□□ -0.36
RPAIN-216ENST00000575599 BPHLQ86WA6 291 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-216ENST00000575599 ZSCAN1Q8NBB4 408 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 ANKRD7Q92527 254 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 N4BP2L2Q92802 583 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-216ENST00000575599 KIAA1143Q96AT1 154 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-216ENST00000575599 RUFY1Q96T51 708 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 CCDC77Q9BR77 488 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 GPN2Q9H9Y4 310 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-216ENST00000575599 TAS2R13Q9NYV9 303 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 NINJ2Q9NZG7 142 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-216ENST00000575599 KLHL42Q9P2K6 505 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 KLHL20Q9Y2M5 609 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 PCDHGA4Q9Y5G9 962 aa12.79□□□□□ -0.36
RPAIN-216ENST00000575599 LOC101059948A0A1B0GTJ6 334 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 SYF2O95926 243 aaKnown RBP12.78□□□□□ -0.36
RPAIN-216ENST00000575599 GSTA2P09210 222 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 MPC1LP0DKB6 136 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 CBSLP0DN79 551 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 MAGP20916 626 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 PSMB5P28074 263 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 SSTR1P30872 391 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 CBSP35520 551 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 STAT5AP42229 794 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 CDKN2DP55273 166 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 IFFO1Q0D2I5 559 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 ABHD18Q0P651 414 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 TSTA3Q13630 321 aaPredicted RBP12.78□□□□□ -0.36
RPAIN-216ENST00000575599 MAP7Q14244 749 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 FRG1Q14331 258 aaKnown RBP12.78□□□□□ -0.36
RPAIN-216ENST00000575599 SF1Q15637 639 aaKnown RBP12.78□□□□□ -0.36
RPAIN-216ENST00000575599 ZIC1Q15915 447 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 HECTD2Q5U5R9 776 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 PRAMEF17Q5VTA0 474 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 C3orf62Q6ZUJ4 267 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 GALNT7Q86SF2 657 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 MREGQ8N565 214 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 OR9A1PQ8NGU1 263 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 OR8K5Q8NH50 307 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 OR1L3Q8NH93 324 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 DENND1AQ8TEH3 1009 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 SLC22A18Q96BI1 424 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 TCTN2Q96GX1 697 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 ACBD3Q9H3P7 528 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 FAM60AQ9NP50 221 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 SPATA7Q9P0W8 599 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 PSAT1Q9Y617 370 aa12.78□□□□□ -0.36
RPAIN-216ENST00000575599 SNRNP200O75643 2136 aaKnown RBP12.77□□□□□ -0.36
RPAIN-216ENST00000575599 A0A087WUV0 522 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-216ENST00000575599 MYO1CO00159 1063 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 RIPK2O43353 540 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 CPNE3O75131 537 aaKnown RBP12.77□□□□□ -0.37
RPAIN-216ENST00000575599 PIAS1O75925 651 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 CCNYL3P0C7X3 344 aa12.77□□□□□ -0.37
RPAIN-216ENST00000575599 CYP2A7P20853 494 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms