RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	C1orf189	Q5VU69	101 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	ARMC3	Q5W041	872 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	ZNF470	Q6ECI4	717 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	C8orf74	Q6P047	294 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	CYHR1	Q6ZMK1	362 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	PRICKLE2	Q7Z3G6	844 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	HOOK3	Q86VS8	718 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	ZBTB2	Q8N680	514 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	ZNF655	Q8N720	491 aa	Predicted RBP	13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	ENDOV	Q8N8Q3	282 aa	Known RBP	13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	ADAMTS17	Q8TE56	1095 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	SKA2	Q8WVK7	121 aa	Predicted RBP	13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	RAD51AP1	Q96B01	352 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	DHCR7	Q9UBM7	475 aa	Known RBP	13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	TLK1	Q9UKI8	766 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	POLH	Q9Y253	713 aa		13.63	□□□□□ -0.23
EDC4-210	ENST00000575507	ARHGEF33	A8MVX0	844 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	NDC80	O14777	642 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	TP73	O15350	636 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	MAP3K7	O43318	606 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	RAD51C	O43502	376 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	CTSV	O60911	334 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	CNOT3	O75175	753 aa	Known RBP	13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	USP1	O94782	785 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	SLU7	O95391	586 aa	Known RBP	13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	PDGFA	P04085	211 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	RPN2	P04844	631 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	RAB40AL	P0C0E4	278 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	PAM	P19021	973 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	GABRB3	P28472	473 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	MPP1	Q00013	466 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	DHX9	Q08211	1270 aa	Known RBP	13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	CHAF1B	Q13112	559 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	THOC5	Q13769	683 aa	Known RBP	13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	SF1	Q15637	639 aa	Known RBP	13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	HSP90AA5P	Q58FG0	334 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	RNF187	Q5TA31	235 aa	Predicted RBP	13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	CPZ	Q66K79	652 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	FIGLA	Q6QHK4	219 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	PCGF5	Q86SE9	256 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	SYVN1	Q86TM6	617 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	MCAT	Q8IVS2	390 aa	Known RBP	13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	NOA1	Q8NC60	698 aa	Known RBP	13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	OR2A1	Q8NGT9	310 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	WDR83	Q9BRX9	315 aa	Known RBP	13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	ERP44	Q9BS26	406 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	NLN	Q9BYT8	704 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	TRIM4	Q9C037	500 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	FAM117A	Q9C073	453 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	RAB17	Q9H0T7	212 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	SLC22A11	Q9NSA0	550 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	INTS10	Q9NVR2	710 aa	Known RBP	13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	EURL	Q9NYK6	297 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	ASIC3	Q9UHC3	531 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	FBXO5	Q9UKT4	447 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	TCFL5	Q9UL49	500 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	SLC39A10	Q9ULF5	831 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	PLCL2	Q9UPR0	1127 aa		13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	UTP11	Q9Y3A2	253 aa	Known RBP	13.62	□□□□□ -0.23
EDC4-210	ENST00000575507	PIKFYVE	Q9Y2I7	2098 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507		H3BMM5	538 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	KDM1A	O60341	852 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	PSIP1	O75475	530 aa	Known RBP	13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	KLF7	O75840	302 aa	Predicted RBP	13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	ERVK-10	P10266	1014 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	ITGAX	P20702	1163 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	MCM3	P25205	808 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	CUL1	Q13616	776 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	CYP2A13	Q16696	494 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	LONRF1	Q17RB8	773 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	RHBDD2	Q6NTF9	364 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	TTC23L	Q6PF05	361 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	APLF	Q8IW19	511 aa	Predicted RBP	13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	GPR135	Q8IZ08	494 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	DTWD1	Q8N5C7	304 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	GSDMB	Q8TAX9	411 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	HMGCLL1	Q8TB92	370 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	SLC22A18	Q96BI1	424 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	GBP5	Q96PP8	586 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	MIPEP	Q99797	713 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	SYNPO2L	Q9H987	977 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	IARS2	Q9NSE4	1012 aa	Known RBP	13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	TP53TG5	Q9Y2B4	290 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	PCSK5	Q92824	1860 aa		13.61	□□□□□ -0.23
EDC4-210	ENST00000575507	PIEZO2	Q9H5I5	2752 aa		13.6	□□□□□ -0.23
EDC4-210	ENST00000575507	EFCAB8	A8MWE9	144 aa		13.6	□□□□□ -0.23
EDC4-210	ENST00000575507	SMAP	O00193	183 aa		13.6	□□□□□ -0.23
EDC4-210	ENST00000575507	PFDN6	O15212	129 aa		13.6	□□□□□ -0.23
EDC4-210	ENST00000575507	ZSCAN9	O15535	394 aa	Predicted RBP	13.6	□□□□□ -0.23
EDC4-210	ENST00000575507	ERG	P11308	486 aa		13.6	□□□□□ -0.23
EDC4-210	ENST00000575507	ATP5D	P30049	168 aa		13.6	□□□□□ -0.23
EDC4-210	ENST00000575507	PGGT1B	P53609	377 aa		13.6	□□□□□ -0.23
EDC4-210	ENST00000575507	PMS2	P54278	862 aa		13.6	□□□□□ -0.23
EDC4-210	ENST00000575507	CRYM	Q14894	314 aa		13.6	□□□□□ -0.23
EDC4-210	ENST00000575507	SLC9A5	Q14940	896 aa		13.6	□□□□□ -0.23
EDC4-210	ENST00000575507	FRMPD2B	Q6IN97	320 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms