RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	PITPNM3	Q9BZ71	974 aa		11.53	□□□□□ -0.56
PRPF8-212	ENST00000575116	TWSG1	Q9GZX9	223 aa		11.53	□□□□□ -0.56
PRPF8-212	ENST00000575116	ILKAP	Q9H0C8	392 aa	Predicted RBP	11.53	□□□□□ -0.56
PRPF8-212	ENST00000575116	IPPK	Q9H8X2	491 aa		11.53	□□□□□ -0.56
PRPF8-212	ENST00000575116	ZBTB26	Q9HCK0	441 aa		11.53	□□□□□ -0.56
PRPF8-212	ENST00000575116	CCDC177	Q9NQR7	707 aa	Predicted RBP	11.53	□□□□□ -0.56
PRPF8-212	ENST00000575116	GPRC5B	Q9NZH0	403 aa		11.53	□□□□□ -0.56
PRPF8-212	ENST00000575116	ICK	Q9UPZ9	632 aa		11.53	□□□□□ -0.56
PRPF8-212	ENST00000575116	SLC22A14	Q9Y267	594 aa		11.53	□□□□□ -0.56
PRPF8-212	ENST00000575116	RAP2C	Q9Y3L5	183 aa		11.53	□□□□□ -0.56
PRPF8-212	ENST00000575116	PCDHGB2	Q9Y5G2	931 aa		11.53	□□□□□ -0.56
PRPF8-212	ENST00000575116	ANKRD12	Q6UB98	2062 aa		11.53	□□□□□ -0.56
PRPF8-212	ENST00000575116	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	PRAMEF33	A0A0G2JMD5	474 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	LILRA5	A6NI73	299 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	GIPC1	O14908	333 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	CLGN	O14967	610 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	PRICKLE3	O43900	615 aa	Predicted RBP	11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	TGDS	O95455	350 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	OTC	P00480	354 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	FGF4	P08620	206 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	NPPB	P16860	134 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	NBL1	P41271	181 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	CDH13	P55290	713 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	TBPL1	P62380	186 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	FASTK	Q14296	549 aa	Known RBP	11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	GPR18	Q14330	331 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	FBXO48	Q5FWF7	155 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	CRLF3	Q8IUI8	442 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	LRRC34	Q8IZ02	419 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	ARL10	Q8N8L6	244 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	FAM181A	Q8N9Y4	354 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	TRPC4AP	Q8TEL6	797 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	SLC22A18	Q96BI1	424 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	PYCR2	Q96C36	320 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	GRAMD1A	Q96CP6	724 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	MED8	Q96G25	268 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	NSUN5	Q96P11	429 aa	Known RBP	11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	IL17F	Q96PD4	163 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	ZNF382	Q96SR6	550 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	SORT1	Q99523	831 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	C20orf27	Q9GZN8	174 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	EPN3	Q9H201	632 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	SRMS	Q9H3Y6	488 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	NOL11	Q9H8H0	719 aa	Known RBP	11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	IL21R	Q9HBE5	538 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	FSCN3	Q9NQT6	498 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	DNAAF2	Q9NVR5	837 aa	Known RBP	11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	PSD3	Q9NYI0	1048 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	CIDEB	Q9UHD4	219 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	PLAGL1	Q9UM63	463 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	ASB1	Q9Y576	335 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	ENTPD2	Q9Y5L3	495 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	KCNE2	Q9Y6J6	123 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116	CACNA1E	Q15878	2313 aa		11.52	□□□□□ -0.57
PRPF8-212	ENST00000575116		A0A1W2PPV9	198 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	KRT87P	A6NCN2	255 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	SLCO1B7	G3V0H7	640 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	OR7A17	O14581	309 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	PPM1D	O15297	605 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	NUDT21	O43809	227 aa	Known RBP	11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	UGDH	O60701	494 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	LYPLA1	O75608	230 aa	Predicted RBP	11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	FKBP9	O95302	570 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	ESRRB	O95718	433 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	CHRNG	P07510	517 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	EBLN1	P0CF75	366 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	PNLIP	P16233	465 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	GNAZ	P19086	355 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	ARRB2	P32121	409 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	CASP2	P42575	452 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	GPR3	P46089	330 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	RPL14	P50914	215 aa	Known RBP	11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	CCNG1	P51959	295 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	ATXN3	P54252	364 aa	Predicted RBP	11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	EPHA4	P54764	986 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	MAZ	P56270	477 aa	Known RBP	11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	SH3BP2	P78314	561 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	CDC16	Q13042	620 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	BIRC2	Q13490	618 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	E2F2	Q14209	437 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	KIR2DS3	Q14952	304 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	PLCL1	Q15111	1095 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	RBBP7	Q16576	425 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	PRAMEF13	Q5VWM6	474 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	LIPJ	Q5W064	366 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	KLHL35	Q6PF15	583 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	DBX2	Q6ZNG2	339 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	RPS27L	Q71UM5	84 aa	Known RBP	11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	MILR1	Q7Z6M3	343 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	CUZD1	Q86UP6	607 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	ADGRF3	Q8IZF5	1079 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	MINDY1	Q8N5J2	469 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	SNX31	Q8N9S9	440 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	L3MBTL4	Q8NA19	623 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	LINC01555	Q8NAE3	123 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	PPFIBP2	Q8ND30	876 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	OR4E2	Q8NGC2	313 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	PIWIL2	Q8TC59	973 aa	Known RBP	11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms