RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-231ENST00000574875 A0A0J9YY10 115 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 GOLGA6L10A6NI86 522 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 H3BMM5 538 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 MEN1O00255 615 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 SYF2O95926 243 aaKnown RBP18.78■□□□□ 0.6
ABR-231ENST00000574875 ESR1P03372 595 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 NUDT17P0C025 328 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 PLA2G2AP14555 144 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 CHRM3P20309 590 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 CYP2A7P20853 494 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 CD9P21926 228 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 PKLRP30613 574 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 ADARP55265 1226 aaKnown RBP18.78■□□□□ 0.6
ABR-231ENST00000574875 ITGA1P56199 1179 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 KCNAB2Q13303 367 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 THOC5Q13769 683 aaKnown RBP18.78■□□□□ 0.6
ABR-231ENST00000574875 GRB7Q14451 532 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 SLC5A12Q1EHB4 618 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 ZNF789Q5FWF6 425 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 ZNF517Q6ZMY9 492 aaPredicted RBP18.78■□□□□ 0.6
ABR-231ENST00000574875 CENPUQ71F23 418 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 TMEM135Q86UB9 458 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 CILP2Q8IUL8 1156 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 PPIL6Q8IXY8 311 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 C2orf73Q8N5S3 287 aaPredicted RBP18.78■□□□□ 0.6
ABR-231ENST00000574875 SKA2Q8WVK7 121 aaPredicted RBP18.78■□□□□ 0.6
ABR-231ENST00000574875 N4BP2L2Q92802 583 aaPredicted RBP18.78■□□□□ 0.6
ABR-231ENST00000574875 ZNF669Q96BR6 464 aaPredicted RBP18.78■□□□□ 0.6
ABR-231ENST00000574875 MENTQ9BUN1 341 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 FAM117AQ9C073 453 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 SLC7A5P2Q9GIP4 190 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 CHRNA10Q9GZZ6 450 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 SLC25A18Q9H1K4 315 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 ACTR5Q9H9F9 607 aaPredicted RBP18.78■□□□□ 0.6
ABR-231ENST00000574875 CIDEBQ9UHD4 219 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 SLC39A10Q9ULF5 831 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 FARSAQ9Y285 508 aaKnown RBP18.78■□□□□ 0.6
ABR-231ENST00000574875 VPS9D1Q9Y2B5 631 aa18.78■□□□□ 0.6
ABR-231ENST00000574875 SEC16AO15027 2179 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 CDC14CA4D256 554 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 E7EQ34 232 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 H3BQF6 201 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 NIPSNAP2O75323 286 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 S1PR4O95977 384 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 FURINP09958 794 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 PTPN4P29074 926 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 PEBP1P30086 187 aaKnown RBP18.77■□□□□ 0.6
ABR-231ENST00000574875 MAGEA3P43357 314 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 ZIC1Q15915 447 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 RNASEH2BQ5TBB1 312 aaKnown RBP18.77■□□□□ 0.6
ABR-231ENST00000574875 GPR135Q8IZ08 494 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 DSELQ8IZU8 1212 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 LINC01555Q8NAE3 123 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 RAD51AP1Q96B01 352 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 SLC22A18Q96BI1 424 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 SIGLEC10Q96LC7 697 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 FOPNLQ96NB1 174 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 IL17FQ96PD4 163 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 CHST8Q9H2A9 424 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 ACTL8Q9H568 366 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 IL1RAPL1Q9NZN1 696 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 TUBD1Q9UJT1 453 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 MAD1L1Q9Y6D9 718 aa18.77■□□□□ 0.6
ABR-231ENST00000574875 ZCWPW2A0A1B0GU75 182 aa18.76■□□□□ 0.59
ABR-231ENST00000574875 RASGRF2O14827 1237 aa18.76■□□□□ 0.59
ABR-231ENST00000574875 EIF3HO15372 352 aaKnown RBP eCLIP18.76■□□□□ 0.59
ABR-231ENST00000574875 ZNF749O43361 778 aa18.76■□□□□ 0.59
ABR-231ENST00000574875 C1orf105O95561 183 aa18.76■□□□□ 0.59
ABR-231ENST00000574875 HBQ1P09105 142 aa18.76■□□□□ 0.59
ABR-231ENST00000574875 PKMP14618 531 aaKnown RBP18.76■□□□□ 0.59
ABR-231ENST00000574875 LCN10Q6JVE6 187 aa18.76■□□□□ 0.59
ABR-231ENST00000574875 LMNTD1Q8N9Z9 388 aa18.76■□□□□ 0.59
ABR-231ENST00000574875 OR2L8Q8NGY9 312 aa18.76■□□□□ 0.59
ABR-231ENST00000574875 SPRTNQ9H040 489 aaPredicted RBP18.76■□□□□ 0.59
ABR-231ENST00000574875 INTS10Q9NVR2 710 aaKnown RBP18.76■□□□□ 0.59
ABR-231ENST00000574875 GALPQ9UBC7 116 aa18.76■□□□□ 0.59
ABR-231ENST00000574875 POLHQ9Y253 713 aa18.76■□□□□ 0.59
ABR-231ENST00000574875 HEMK1Q9Y5R4 338 aaPredicted RBP18.76■□□□□ 0.59
ABR-231ENST00000574875 KCNMB2Q9Y691 235 aa18.76■□□□□ 0.59
ABR-231ENST00000574875 NFS1Q9Y697 457 aa18.76■□□□□ 0.59
ABR-231ENST00000574875 SNRNP200O75643 2136 aaKnown RBP18.75■□□□□ 0.59
ABR-231ENST00000574875 USP1O94782 785 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 RORAP35398 523 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 GABRA4P48169 554 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 CBX1P83916 185 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 CTBP1Q13363 440 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 SF1Q15637 639 aaKnown RBP18.75■□□□□ 0.59
ABR-231ENST00000574875 ZNF470Q6ECI4 717 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 CCDC25Q86WR0 208 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 FAM20CQ8IXL6 584 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 AGGF1Q8N302 714 aaeCLIP18.75■□□□□ 0.59
ABR-231ENST00000574875 DNAJC22Q8N4W6 341 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 MAGEC3Q8TD91 643 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 FAM136AQ96C01 138 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 TMEM109Q9BVC6 243 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 RAB11FIP5Q9BXF6 653 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 C20orf96Q9NUD7 363 aaPredicted RBP18.75■□□□□ 0.59
ABR-231ENST00000574875 PCMTD2Q9NV79 361 aa18.75■□□□□ 0.59
ABR-231ENST00000574875 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.75■□□□□ 0.59
ABR-231ENST00000574875 AP1M2Q9Y6Q5 423 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms