RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 DNAJC11Q9NVH1 559 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 ADAMTS9Q9P2N4 1935 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 OR7A17O14581 309 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 KITP10721 976 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 EPB42P16452 691 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 EPORP19235 508 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 RAB28P51157 221 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 SH3BP2P78314 561 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 GPR18Q14330 331 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 ARHGAP19Q14CB8 494 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 CGB2Q6NT52 195 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 CUZD1Q86UP6 607 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 RAB42Q8N4Z0 105 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 DCBLD1Q8N8Z6 715 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 LINC01555Q8NAE3 123 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 OR52B6Q8NGF0 335 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 THOC1Q96FV9 657 aaKnown RBP23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 NSRP1Q9H0G5 558 aaKnown RBP23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 IPPKQ9H8X2 491 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 EML4Q9HC35 981 aaKnown RBP23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 MID1IP1Q9NPA3 183 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 PNPOQ9NVS9 261 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 RAP2CQ9Y3L5 183 aa23.29■■□□□ 1.32
ATPAF1-213ENST00000574428 PCDH15Q96QU1 1955 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 MLYCDO95822 493 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 PRDX3P30048 256 aaKnown RBP23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 HSD17B2P37059 387 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 NAA20P61599 178 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 TCEAL6Q6IPX3 200 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 CAPN13Q6MZZ7 669 aaPredicted RBP23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 SLC9B2Q86UD5 537 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 GATAD2AQ86YP4 633 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 KLHDC8AQ8IYD2 350 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 PRSS33Q8NF86 280 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 LCN9Q8WX39 176 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 TCEAL3Q969E4 200 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 OR4K3Q96R72 315 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 SGPP1Q9BX95 441 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 ILKAPQ9H0C8 392 aaPredicted RBP23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 CCDC177Q9NQR7 707 aaPredicted RBP23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 ZDHHC2Q9UIJ5 367 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 PCDHGA5Q9Y5G8 931 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 CSNK1G3Q9Y6M4 447 aa23.28■■□□□ 1.32
ATPAF1-213ENST00000574428 TMEM233B4DJY2 109 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 ARHGAP33O14559 1287 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 NOBOXO60393 691 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 ARL1P40616 181 aaPredicted RBP23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 PIK3CGP48736 1102 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 HHEXQ03014 270 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 GALNT1Q10472 559 aaPredicted RBP23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 TCF15Q12870 199 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 PRKAA1Q13131 559 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 PLCL1Q15111 1095 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 SH2D4BQ5SQS7 431 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 GKAP1Q5VSY0 366 aaPredicted RBP23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 IL27RAQ6UWB1 636 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 SYVN1Q86TM6 617 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 AGAP11Q8TF27 550 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 SEC16BQ96JE7 1060 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 CDK15Q96Q40 435 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 RAB11FIP5Q9BXF6 653 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 GMEB2Q9UKD1 530 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 MYO15AQ9UKN7 3530 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 KDM1AO60341 852 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 GIMD1P0DJR0 217 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 ZNF761Q86XN6 746 aaPredicted RBP23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 KYQ8NBH2 561 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 OR4E2Q8NGC2 313 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 ATP6V1E2Q96A05 226 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 ZNF382Q96SR6 550 aa23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 GTPBP2Q9BX10 602 aaKnown RBP23.27■■□□□ 1.32
ATPAF1-213ENST00000574428 FRYLO94915 3013 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 ZNF839A8K0R7 811 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 CCNG1P51959 295 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 CDC16Q13042 620 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 THEMIS2Q5TEJ8 643 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 LAIR1Q6GTX8 287 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 GPRIN3Q6ZVF9 776 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 KANSL1Q7Z3B3 1105 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 AMIGO1Q86WK6 493 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 ARL14Q8N4G2 192 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 OR2L8Q8NGY9 312 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 SAP25Q8TEE9 199 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 NUSAP1Q9BXS6 441 aaKnown RBP23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 NPHS2Q9NP85 383 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 HAO1Q9UJM8 370 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 ZNF225Q9UK10 706 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 FIS1Q9Y3D6 152 aa23.26■■□□□ 1.31
ATPAF1-213ENST00000574428 DFNA5O60443 496 aa23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 KATNA1O75449 491 aa23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 SNUPNO95149 360 aaKnown RBP23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 SYPP08247 313 aa23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 SHMT2P34897 504 aa23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 ERVPABLB-1P60509 514 aa23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 TRAF3Q13114 568 aa23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 OGFOD3Q6PK18 319 aa23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 PIGWQ7Z7B1 504 aa23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 CACNA2D3Q8IZS8 1091 aa23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 PIWIL2Q8TC59 973 aaKnown RBP23.25■■□□□ 1.31
ATPAF1-213ENST00000574428 SMPDL3AQ92484 453 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms