RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 KIF1CO43896 1103 aaKnown RBP10.66□□□□□ -0.7
CHD3-216ENST00000573936 SYF2O95926 243 aaKnown RBP10.66□□□□□ -0.7
CHD3-216ENST00000573936 INHBAP08476 426 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 FAM153BP0C7A2 387 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 FGF3P11487 239 aaPredicted RBP10.66□□□□□ -0.7
CHD3-216ENST00000573936 ZNF37AP17032 561 aaPredicted RBP10.66□□□□□ -0.7
CHD3-216ENST00000573936 CRABP2P29373 138 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 OAS2P29728 719 aaKnown RBP10.66□□□□□ -0.7
CHD3-216ENST00000573936 MSH2P43246 934 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 SEPHS1P49903 392 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 SERPINB9P50453 376 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 HSD11B2P80365 405 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 ACY1Q03154 408 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 GRB7Q14451 532 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 NAA25Q14CX7 972 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 CYP2A13Q16696 494 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 TBC1D25Q3MII6 688 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 FAM153CQ494X1 144 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 DCAF12Q5T6F0 453 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 SPESP1Q6UW49 350 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 CEACAM20Q6UY09 585 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 CCDC91Q7Z6B0 441 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 BPHLQ86WA6 291 aaPredicted RBP10.66□□□□□ -0.7
CHD3-216ENST00000573936 RASGRP3Q8IV61 690 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 SNIP1Q8TAD8 396 aaKnown RBP10.66□□□□□ -0.7
CHD3-216ENST00000573936 SLC41A2Q96JW4 573 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 CCDC138Q96M89 665 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 TEFMQ96QE5 360 aaKnown RBP10.66□□□□□ -0.7
CHD3-216ENST00000573936 OR2A14Q96R47 310 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 PKP4Q99569 1192 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 CCDC77Q9BR77 488 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 MENTQ9BUN1 341 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 DDA1Q9BW61 102 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 ASPSCR1Q9BZE9 553 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 TWSG1Q9GZX9 223 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 GPAMQ9HCL2 828 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 INTS7Q9NVH2 962 aaKnown RBP10.66□□□□□ -0.7
CHD3-216ENST00000573936 OCIAD1Q9NX40 245 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 NOVA2Q9UNW9 492 aaKnown RBP10.66□□□□□ -0.7
CHD3-216ENST00000573936 PCDHGA7Q9Y5G6 932 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 PIEZO2Q9H5I5 2752 aa10.66□□□□□ -0.7
CHD3-216ENST00000573936 A0A0J9YY10 115 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 A0A1W2PNU3 283 aaPredicted RBP10.65□□□□□ -0.7
CHD3-216ENST00000573936 CDRT15L2A8MXV6 281 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 ERVH48-1M5A8F1 160 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 AGRPO00253 132 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 POLR1CO15160 346 aaPredicted RBP10.65□□□□□ -0.7
CHD3-216ENST00000573936 RIPK2O43353 540 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 FAM155BO75949 473 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 TSPAN12O95859 305 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 TUBBP07437 444 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 ENO2P09104 434 aaPredicted RBP10.65□□□□□ -0.7
CHD3-216ENST00000573936 ERGP11308 486 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 CCL4P13236 92 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 HGFP14210 728 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 UGT2B7P16662 529 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 ITIH1P19827 911 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 CNTFP26441 200 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 CD82P27701 267 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 ETV5P41161 510 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 PNLIPRP1P54315 467 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 AP1S2P56377 157 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 RAB10P61026 200 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 PPP1CAP62136 330 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 IL11RAQ14626 422 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 EFTUD2Q15029 972 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHD3-216ENST00000573936 UAP1Q16222 522 aaPredicted RBP10.65□□□□□ -0.7
CHD3-216ENST00000573936 CCSMST1Q4G0I0 132 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.65□□□□□ -0.7
CHD3-216ENST00000573936 LGSNQ5TDP6 509 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 RAPH1Q70E73 1250 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 CLEC14AQ86T13 490 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 D2HGDHQ8N465 521 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 BMPERQ8N8U9 685 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 LINC01555Q8NAE3 123 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 DENND1AQ8TEH3 1009 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 SLC44A1Q8WWI5 657 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 ATL1Q8WXF7 558 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 SMPDL3AQ92484 453 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 USP7Q93009 1102 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 TCTN2Q96GX1 697 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 IL17FQ96PD4 163 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 TRAPPC9Q96Q05 1148 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 PITPNM3Q9BZ71 974 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 TXLNGYQ9BZA5 131 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 DERL2Q9GZP9 239 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 FANCEQ9HB96 536 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 PDE7BQ9NP56 450 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 ASCL3Q9NQ33 180 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 SOHLH2Q9NX45 425 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 SPHK1Q9NYA1 384 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.65□□□□□ -0.7
CHD3-216ENST00000573936 ZNF180Q9UJW8 692 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 PDE10AQ9Y233 779 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 BTRCQ9Y297 605 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 PCDHGA3Q9Y5H0 932 aa10.65□□□□□ -0.7
CHD3-216ENST00000573936 SLC9B1P1A6NJY1 282 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 TARM1B6A8C7 271 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 POC1B-GALNT4F8VUJ3 575 aa10.64□□□□□ -0.71
CHD3-216ENST00000573936 KRT38O76015 456 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms