RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 AGGF1Q8N302 714 aaeCLIP12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 DNAJC22Q8N4W6 341 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 NAT8LQ8N9F0 302 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 MAGEC3Q8TD91 643 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 MIPEPQ99797 713 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 NDC1Q9BTX1 674 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 ING2Q9H160 280 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 EPN3Q9H201 632 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 CCDC68Q9H2F9 335 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 CLMPQ9H6B4 373 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 FBXO6Q9NRD1 293 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 C20orf96Q9NUD7 363 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 INTS10Q9NVR2 710 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 EURLQ9NYK6 297 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 IFT80Q9P2H3 777 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 GALPQ9UBC7 116 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 NDOR1Q9UHB4 597 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 ANAPC2Q9UJX6 822 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 SRPK3Q9UPE1 567 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 PIKFYVEQ9Y2I7 2098 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 BOD1L1Q8NFC6 3051 aa12.22□□□□□ -0.45
NPLOC4-213ENST00000573519 H3BMH7 237 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 USP1O94782 785 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 CAPN1P07384 714 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 ALAS2P22557 587 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 OTX2P32243 289 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 SLC1A2P43004 574 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 ADARP55265 1226 aaKnown RBP12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 DCDP81605 110 aaKnown RBP12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 KLRB1Q12918 225 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 TSTA3Q13630 321 aaPredicted RBP12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 LONRF1Q17RB8 773 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 KLHL38Q2WGJ6 581 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 ACSBG2Q5FVE4 666 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 ZC3H12BQ5HYM0 836 aaKnown RBP12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 ZNF385CQ66K41 422 aaPredicted RBP12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 FCRL6Q6DN72 434 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 RHBDD2Q6NTF9 364 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 TCTN3Q6NUS6 607 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 FIGLAQ6QHK4 219 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 MCATQ8IVS2 390 aaKnown RBP12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 DENND6AQ8IWF6 608 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 TEX19Q8NA77 164 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 C17orf62Q9BQA9 187 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 CHRNA10Q9GZZ6 450 aa12.21□□□□□ -0.45
NPLOC4-213ENST00000573519 ZCWPW2A0A1B0GU75 182 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 DNALI1O14645 258 aaPredicted RBP12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 BANF1O75531 89 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 ATP5DP30049 168 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 CASRP41180 1078 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 FOLR3P41439 243 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 CSRP3P50461 194 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 PGDP52209 483 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 MRPS25P82663 173 aaKnown RBP12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 CUL1Q13616 776 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 PTK6Q13882 451 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 TTLL9Q3SXZ7 439 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 TTLL10Q6ZVT0 673 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 RAB43Q86YS6 212 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 PROKR1Q8TCW9 393 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 ADAMTS17Q8TE56 1095 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 DLG3Q92796 817 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 SIGLEC10Q96LC7 697 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 GBP5Q96PP8 586 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 SELENOSQ9BQE4 189 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 TRIM51Q9BSJ1 452 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 DHRS4Q9BTZ2 278 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 SLC25A23Q9BV35 468 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 ACAT2Q9BWD1 397 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 FAM114A2Q9NRY5 505 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 ABCF3Q9NUQ8 709 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 SPATA7Q9P0W8 599 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 PCYOX1Q9UHG3 505 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 PTRH2Q9Y3E5 179 aaKnown RBP12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 BSNQ9UPA5 3926 aa12.2□□□□□ -0.46
NPLOC4-213ENST00000573519 TENM4Q6N022 2769 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 A6NL46 340 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 ARHGEF33A8MVX0 844 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 MATN4O95460 622 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 SYF2O95926 243 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 CATP04040 527 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 PDGFAP04085 211 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 MCM3P25205 808 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 PAFAH1B1P43034 410 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 MAGEA3P43357 314 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 CLCN7P51798 805 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 ARSFP54793 590 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 MPP1Q00013 466 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 DR1Q01658 176 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 ATP1A4Q13733 1029 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 FASTKQ14296 549 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 GBX1Q14549 363 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 NKAIN1Q4KMZ8 207 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 HSP90AA5PQ58FG0 334 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 KCNMB4Q86W47 210 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 SPNS2Q8IVW8 549 aa12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 TTC29Q8NA56 475 aaPredicted RBP12.19□□□□□ -0.46
NPLOC4-213ENST00000573519 OR2L3Q8NG85 312 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms