RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 KCNH6Q9H252 994 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 VNN3Q9NY84 501 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 KIAA1522Q9P206 1035 aaPredicted RBP10.93□□□□□ -0.66
RPAIN-212ENST00000573126 C3orf18Q9UK00 162 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 SNX6Q9UNH7 406 aa10.93□□□□□ -0.66
RPAIN-212ENST00000573126 LOC100130705A0A1B0GUX0 176 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 C16orf96A6NNT2 1141 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 FAM220BPB1ANY3 271 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 TEX28O15482 410 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 MITFO75030 526 aaPredicted RBP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 SEC14L2O76054 403 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 HIST1H2AGP0C0S8 130 aaPredicted RBP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 CYP4B1P13584 511 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 HIST1H2ADP20671 130 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 HLA-FP30511 346 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 GZMMP51124 257 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 PLA2G16P53816 162 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 SNRPD1P62314 119 aaKnown RBP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 IL1RL1Q01638 556 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 NOGQ13253 232 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 LRIF1Q5T3J3 769 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 LAIR2Q6ISS4 152 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 ANKRD26P1Q6NSI1 321 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 DUS1LQ6P1R4 473 aaKnown RBP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 RNF165Q6ZSG1 346 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 CALHM3Q86XJ0 350 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 ZCCHC7Q8N3Z6 543 aaKnown RBP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 TERB1Q8NA31 727 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 CDC26Q8NHZ8 85 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 HDAC2Q92769 488 aaKnown RBP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 HIST1H2AHQ96KK5 128 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 RDH12Q96NR8 316 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 HIST1H2AJQ99878 128 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 H2AFJQ9BTM1 129 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 BBS2Q9BXC9 721 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 SUV39H2Q9H5I1 410 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 RMND5AQ9H871 391 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 AASSQ9UDR5 926 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 FBXO10Q9UK96 956 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 TMPRSS11EQ9UL52 423 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 CDH23Q9H251 3354 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 A0A096LPI6 279 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 A0A1W2PRU2 124 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 SH3PXD2BA1X283 911 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 XPNPEP2O43895 674 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 MAN1A2O60476 641 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 DIRAS1O95057 198 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 OR56A5P0C7T3 313 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 CBSLP0DN79 551 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 EFNA1P20827 205 aaPredicted RBP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 AOAHP28039 575 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 CBSP35520 551 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 HALP42357 657 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 CSNK1DP48730 415 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 GRSF1Q12849 480 aaKnown RBP eCLIP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 GTF2H3Q13889 308 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 RBM48Q5RL73 367 aaKnown RBP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 METTL2BQ6P1Q9 378 aaKnown RBP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 DPY19L3Q6ZPD9 716 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 FAM217AQ8IXS0 508 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 PLPP6Q8IY26 295 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 TCEAL8Q8IYN2 117 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 BEND7Q8N7W2 519 aaPredicted RBP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 ARL10Q8N8L6 244 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 FIBINQ8TAL6 211 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 CNIH3Q8TBE1 160 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 ASB11Q8WXH4 323 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 MRPS31Q92665 395 aaKnown RBP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 SCAMP4Q969E2 229 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 NRBF2Q96F24 287 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 PYURFQ96I23 114 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 CCDC138Q96M89 665 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 LYSMD1Q96S90 227 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 CSF3RQ99062 836 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 SLC12A9Q9BXP2 914 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 CCDC90BQ9GZT6 254 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 SLCO3A1Q9UIG8 710 aa10.92□□□□□ -0.66
RPAIN-212ENST00000573126 TMEFF2Q9UIK5 374 aaPredicted RBP10.92□□□□□ -0.66
RPAIN-212ENST00000573126 KCNE1BA0A087WTH5 132 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 PABPN1LA6NDY0 278 aaKnown RBP10.91□□□□□ -0.66
RPAIN-212ENST00000573126 XYLBO75191 536 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 SH3BGRLO75368 114 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 DDX39BQ13838 428 aaKnown RBP10.91□□□□□ -0.66
RPAIN-212ENST00000573126 SKIV2LQ15477 1246 aaKnown RBP10.91□□□□□ -0.66
RPAIN-212ENST00000573126 SF1Q15637 639 aaKnown RBP10.91□□□□□ -0.66
RPAIN-212ENST00000573126 DPY19L1Q2PZI1 675 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 MPPE1Q53F39 396 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 C22orf39Q6P5X5 142 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 LRRC70Q7Z2Q7 622 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 CYP2U1Q7Z449 544 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 CROCCP3Q8IVE0 287 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 ZDHHC21Q8IVQ6 265 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 SLC39A11Q8N1S5 342 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 OR7A2PQ8NGA2 310 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 OR5K1Q8NHB7 308 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 ZNF558Q96NG5 402 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 BRD9Q9H8M2 597 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
RPAIN-212ENST00000573126 PAK1IP1Q9NWT1 392 aaPredicted RBP10.91□□□□□ -0.66
RPAIN-212ENST00000573126 USE1Q9NZ43 259 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms