RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 C1GALT1Q9NS00 363 aa14.33□□□□□ -0.12
NPLOC4-207ENST00000572346 MARCH4Q9P2E8 410 aaPredicted RBP14.33□□□□□ -0.12
NPLOC4-207ENST00000572346 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.33□□□□□ -0.12
NPLOC4-207ENST00000572346 SNX7Q9UNH6 387 aa14.33□□□□□ -0.12
NPLOC4-207ENST00000572346 VPS9D1Q9Y2B5 631 aa14.33□□□□□ -0.12
NPLOC4-207ENST00000572346 MAP4K5Q9Y4K4 846 aa14.33□□□□□ -0.12
NPLOC4-207ENST00000572346 COLEC10Q9Y6Z7 277 aa14.33□□□□□ -0.12
NPLOC4-207ENST00000572346 V9GYY5 206 aaPredicted RBP14.33□□□□□ -0.12
NPLOC4-207ENST00000572346 CEACAM4O75871 244 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 AGFG2O95081 481 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 GSTA2P09210 222 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 ERVK-10P10266 1014 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 SSTR1P30872 391 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 RORAP35398 523 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 PRLHRP49683 370 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 KRT33BQ14525 404 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 ZNF789Q5FWF6 425 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 RNF187Q5TA31 235 aaPredicted RBP14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 FHL5Q5TD97 284 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 FAM69BQ5VUD6 431 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 C3orf62Q6ZUJ4 267 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 ACVR1CQ8NER5 493 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 OR1L3Q8NH93 324 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 HM13Q8TCT9 377 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 CLIP3Q96DZ5 547 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 TCF12Q99081 682 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 WDR83Q9BRX9 315 aaKnown RBP14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 CCM2Q9BSQ5 444 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 NLNQ9BYT8 704 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 VPS37BQ9H9H4 285 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 FANCEQ9HB96 536 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 TCFL5Q9UL49 500 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 PCDHGB7Q9Y5F8 929 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 HEBP2Q9Y5Z4 205 aa14.32□□□□□ -0.12
NPLOC4-207ENST00000572346 TMEM150CB9EJG8 249 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 MATN2O00339 956 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 QSOX1O00391 747 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 AP2A2O94973 939 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 CAPN1P07384 714 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 OR56A5P0C7T3 313 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 PRDX3P30048 256 aaKnown RBP14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 MGAT5Q09328 741 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 CTBP1Q13363 440 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 SLMAPQ14BN4 828 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 ERCC6LQ2NKX8 1250 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 HIST2H2BCQ6DN03 193 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 FAM198BQ6UWH4 519 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 FDCSPQ8NFU4 85 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 LCN9Q8WX39 176 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 CDKL2Q92772 493 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 NRTNQ99748 197 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 CCDC68Q9H2F9 335 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 SRMSQ9H3Y6 488 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 ACTR5Q9H9F9 607 aaPredicted RBP14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 SYTL2Q9HCH5 934 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 RRAGDQ9NQL2 400 aaPredicted RBP14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 PCMTD2Q9NV79 361 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 PLEKHB1Q9UF11 243 aaPredicted RBP14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 FBXO5Q9UKT4 447 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 ZNF451Q9Y4E5 1061 aa14.31□□□□□ -0.12
NPLOC4-207ENST00000572346 TEX15Q9BXT5 2789 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 IGLV3-16A0A075B6K0 115 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 C17orf113A0A1B0GUU1 675 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 GSAPA4D1B5 854 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 BTN3A3O00478 584 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 BTN3A1O00481 513 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 PRMT5O14744 637 aaPredicted RBP14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 OR1I1O60431 355 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 MSL3P1P0C860 447 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 ST6GAL1P15907 406 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 MCM3P25205 808 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 ECHS1P30084 290 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 PHBP35232 272 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 SLC1A2P43004 574 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 PREPP48147 710 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 EIF3BP55884 814 aaKnown RBP14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 ITGA1P56199 1179 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 FRG1Q14331 258 aaKnown RBP14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 KYNUQ16719 465 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 TYSND1Q2T9J0 566 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 PRR30Q53SZ7 412 aaPredicted RBP14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 PTRHD1Q6GMV3 140 aaKnown RBP14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 JMJD6Q6NYC1 403 aaPredicted RBP14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 TRMT10BQ6PF06 316 aaKnown RBP14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 PACS1Q6VY07 963 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 CILP2Q8IUL8 1156 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 DENND6AQ8IWF6 608 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 GSPT2Q8IYD1 628 aaKnown RBP14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 SYTL1Q8IYJ3 562 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 CLDN19Q8N6F1 224 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 EIF1ADQ8N9N8 165 aaKnown RBP14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 Q8NA96 180 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 FERD3LQ96RJ6 166 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 NUDT9Q9BW91 350 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 TSSK1BQ9BXA7 367 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 PITPNM3Q9BZ71 974 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 OR52A5Q9H2C5 316 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 ANKZF1Q9H8Y5 726 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 COG4Q9H9E3 785 aa14.3□□□□□ -0.12
NPLOC4-207ENST00000572346 FBXO6Q9NRD1 293 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms