RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 OR10Q1Q8NGQ4 319 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 PSMA8Q8TAA3 256 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 DYNC2LI1Q8TCX1 351 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 FCGR1BQ92637 280 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 TBC1D20Q96BZ9 403 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 LGALS12Q96DT0 336 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 TSSK3Q96PN8 268 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 DOCK3Q8IZD9 2030 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 CD36P16671 472 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 HOXD12P35452 270 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 HMGCLP35914 325 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 PPP5CP53041 499 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 NCS1P62166 190 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 MFSD14CQ5VZR4 134 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 DOK6Q6PKX4 331 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 SLC24A5Q71RS6 500 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 SNX20Q7Z614 316 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 SLC22A16Q86VW1 577 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 TSPYL5Q86VY4 417 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-207ENST00000572253 CYP4Z1Q86W10 505 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 ARMC8Q8IUR7 673 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 ZNF300Q96RE9 604 aaPredicted RBP10.5□□□□□ -0.73
CCDC40-207ENST00000572253 AASDHPPTQ9NRN7 309 aa10.5□□□□□ -0.73
CCDC40-207ENST00000572253 ISPDA4D126 451 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 SLC38A8A6NNN8 435 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 B4GALT3O60512 393 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 MAGEA2P43356 314 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 TUBA1BP68363 451 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 PHKG1Q16816 387 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 KIAA1614Q5VZ46 1190 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 TMEM53Q6P2H8 277 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 LINGO4Q6UY18 593 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 TUBA1AQ71U36 451 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 C16orf59Q7L2K0 433 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 ZNF513Q8N8E2 541 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-207ENST00000572253 MYO19Q96H55 970 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 HERC2P3Q9BVR0 1158 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 IL1RAPQ9NPH3 570 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 PLXNA3P51805 1871 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 GBF1Q92538 1859 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 EFCAB9A8MZ26 197 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 GPR39O43194 453 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 EPN2O95208 641 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 TGM1P22735 817 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 KIR3DL1P43629 444 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 DUSP4Q13115 394 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 GPR17Q13304 367 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 LAPTM4AQ15012 233 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 MAD2L1BPQ15013 274 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-207ENST00000572253 TTC23LQ6PF05 361 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 MSANTD1Q6ZTZ1 278 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 USP7Q93009 1102 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 PLD4Q96BZ4 506 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 DSN1Q9H410 356 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 PCDH12Q9NPG4 1184 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 ACOT13Q9NPJ3 140 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 H7C4K7 107 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 F11P03951 625 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 ZDHHC11BP0C7U3 371 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 CD40LGP29965 261 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 CLK3P49761 638 aaKnown RBP10.49□□□□□ -0.73
CCDC40-207ENST00000572253 DAPP51397 102 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 CARD16Q5EG05 197 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 KDM4DQ6B0I6 523 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 AHSA2Q719I0 299 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 EFHD2Q96C19 240 aaPredicted RBP10.49□□□□□ -0.73
CCDC40-207ENST00000572253 INPP5KQ9BT40 448 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 DCSTAMPQ9H295 470 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 MMP27Q9H306 513 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 ABCB10Q9NRK6 738 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 ARL15Q9NXU5 204 aa10.49□□□□□ -0.73
CCDC40-207ENST00000572253 H3BNC9 293 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 hCG_2039718K7EN88 272 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 PARNO95453 639 aaKnown RBP10.48□□□□□ -0.73
CCDC40-207ENST00000572253 FUT4P22083 530 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 CORO1AP31146 461 aaKnown RBP10.48□□□□□ -0.73
CCDC40-207ENST00000572253 S100A5P33763 92 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 TRPC1P48995 793 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 FCGRTP55899 365 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 ABRQ12979 859 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 FADDQ13158 208 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 HECTD3Q5T447 861 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 TUBA3EQ6PEY2 450 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 SNX29P2Q8IUI4 249 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 RHOXF1Q8NHV9 184 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 ITPAQ9BY32 194 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 CEP44Q9C0F1 390 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 RUBCNLQ9H714 662 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 ZFYVE1Q9HBF4 777 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 RDH14Q9HBH5 336 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 CPNE5Q9HCH3 593 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 RASSF1Q9NS23 344 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 VNN3Q9NY84 501 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 ANKMY1Q9P2S6 941 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 A0A0U1RQS6 177 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 CLDN24A6NM45 220 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 MYO1DO94832 1006 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 PPP3CCP48454 512 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 PTPRRQ15256 657 aa10.48□□□□□ -0.73
CCDC40-207ENST00000572253 INO80DQ53TQ3 878 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms