RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 HPP00738 406 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 F10P00742 488 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 APOC2P02655 101 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 FTH1P02794 183 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 NSG1P42857 185 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 TNFSF10P50591 281 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 CACNG1Q06432 222 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 KLC1Q07866 573 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 BBS12Q6ZW61 710 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 NLRP9Q7RTR0 991 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 TMTC1Q8IUR5 882 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 KATNAL2Q8IYT4 538 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 TTC29Q8NA56 475 aaPredicted RBP18.99■□□□□ 0.63
CCDC40-206ENST00000572083 OR8K1Q8NGG5 319 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 CCDC110Q8TBZ0 833 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 CHP1Q99653 195 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 SELENOSQ9BQE4 189 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 NLE1Q9NVX2 485 aaPredicted RBP18.99■□□□□ 0.63
CCDC40-206ENST00000572083 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.99■□□□□ 0.63
CCDC40-206ENST00000572083 IMPACTQ9P2X3 320 aa18.99■□□□□ 0.63
CCDC40-206ENST00000572083 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.99■□□□□ 0.63
CCDC40-206ENST00000572083 TRAV17A0A0B4J275 112 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 KDM1AO60341 852 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 RAB28P51157 221 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 GRM7Q14831 915 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 INAQ16352 499 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 VWA2Q5GFL6 755 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 CCDC181Q5TID7 509 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 TMEM207Q6UWW9 146 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 ARHGEF18Q6ZSZ5 1173 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 KBTBD2Q8IY47 623 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 SIRT6Q8N6T7 355 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 BRIX1Q8TDN6 353 aaKnown RBP18.98■□□□□ 0.63
CCDC40-206ENST00000572083 IL17FQ96PD4 163 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 FAM118BQ9BPY3 351 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 ALG6Q9Y672 507 aa18.98■□□□□ 0.63
CCDC40-206ENST00000572083 OR51F1A6NGY5 319 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 QSOX1O00391 747 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 KCNN4O15554 427 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 USP1O94782 785 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 MED26O95402 600 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 UQCRHP07919 91 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 PRR35P0CG20 571 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 TPH1P17752 444 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 SOX11P35716 441 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 CA7P43166 264 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 ZC3H12BQ5HYM0 836 aaKnown RBP18.97■□□□□ 0.63
CCDC40-206ENST00000572083 TCTE1Q5JU00 501 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 YOD1Q5VVQ6 348 aaPredicted RBP18.97■□□□□ 0.63
CCDC40-206ENST00000572083 FIGLAQ6QHK4 219 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 RCOR2Q8IZ40 523 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 ACTL9Q8TC94 416 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 STT3BQ8TCJ2 826 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 PSMF1Q92530 271 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 CDKN2AIPNLQ96HQ2 116 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 CCDC42Q96M95 316 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 FERMT1Q9BQL6 677 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 MENTQ9BUN1 341 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.97■□□□□ 0.63
CCDC40-206ENST00000572083 NHEJ1Q9H9Q4 299 aaPredicted RBP18.97■□□□□ 0.63
CCDC40-206ENST00000572083 ARNT2Q9HBZ2 717 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 ZNHIT6Q9NWK9 470 aaKnown RBP18.97■□□□□ 0.63
CCDC40-206ENST00000572083 C3orf18Q9UK00 162 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 ITPR3Q14573 2671 aa18.97■□□□□ 0.63
CCDC40-206ENST00000572083 NSG1A0A0A6YYJ2 146 aa18.96■□□□□ 0.63
CCDC40-206ENST00000572083 ZGLP1P0C6A0 271 aa18.96■□□□□ 0.63
CCDC40-206ENST00000572083 MST1P26927 711 aa18.96■□□□□ 0.63
CCDC40-206ENST00000572083 CARSP49589 748 aaKnown RBP18.96■□□□□ 0.63
CCDC40-206ENST00000572083 VSX2P58304 361 aaPredicted RBP18.96■□□□□ 0.63
CCDC40-206ENST00000572083 POU6F1Q14863 301 aa18.96■□□□□ 0.63
CCDC40-206ENST00000572083 SF1Q15637 639 aaKnown RBP18.96■□□□□ 0.63
CCDC40-206ENST00000572083 RPTNQ6XPR3 784 aa18.96■□□□□ 0.63
CCDC40-206ENST00000572083 CDKL3Q8IVW4 592 aaPredicted RBP18.96■□□□□ 0.63
CCDC40-206ENST00000572083 MIEF2Q96C03 454 aa18.96■□□□□ 0.63
CCDC40-206ENST00000572083 LUC7LQ9NQ29 371 aaKnown RBP18.96■□□□□ 0.63
CCDC40-206ENST00000572083 INTS7Q9NVH2 962 aaKnown RBP18.96■□□□□ 0.63
CCDC40-206ENST00000572083 PIH1D1Q9NWS0 290 aaKnown RBP18.96■□□□□ 0.63
CCDC40-206ENST00000572083 SEC14L3Q9UDX4 400 aa18.96■□□□□ 0.63
CCDC40-206ENST00000572083 FEZ2Q9UHY8 353 aaPredicted RBP18.96■□□□□ 0.63
CCDC40-206ENST00000572083 FITM1A5D6W6 292 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 STK10O94804 968 aaKnown RBP18.95■□□□□ 0.62
CCDC40-206ENST00000572083 CELA2AP08217 269 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 OR56A5P0C7T3 313 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 COX6A1P12074 109 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 CD9P21926 228 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 MSNP26038 577 aaKnown RBP18.95■□□□□ 0.62
CCDC40-206ENST00000572083 OCA2Q04671 838 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 EEF1A2Q05639 463 aaKnown RBP18.95■□□□□ 0.62
CCDC40-206ENST00000572083 ITIH4Q14624 930 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 FRMPD2BQ6IN97 320 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 MTFR2Q6P444 385 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 PACS1Q6VY07 963 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 VRK3Q8IV63 474 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 ZNF295-AS1Q8N0V1 137 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 CFAP61Q8NHU2 1237 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 KRT35Q92764 455 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 SLC22A18Q96BI1 424 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 SPATA13Q96N96 652 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 ZNF285Q96NJ3 590 aa18.95■□□□□ 0.62
CCDC40-206ENST00000572083 ZNF304Q9HCX3 659 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms