RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 KCNN3Q9UGI6 736 aa9.95□□□□□ -0.82
CTDNEP1-202ENST00000570380 LIMA1Q9UHB6 759 aaKnown RBP9.95□□□□□ -0.82
CTDNEP1-202ENST00000570380 FKBPLQ9UIM3 349 aa9.95□□□□□ -0.82
CTDNEP1-202ENST00000570380 ST6GALNAC2Q9UJ37 374 aa9.95□□□□□ -0.82
CTDNEP1-202ENST00000570380 MYO6Q9UM54 1294 aa9.95□□□□□ -0.82
CTDNEP1-202ENST00000570380 PPT2Q9UMR5 302 aa9.95□□□□□ -0.82
CTDNEP1-202ENST00000570380 HRNRQ86YZ3 2850 aaPredicted RBP9.95□□□□□ -0.82
CTDNEP1-202ENST00000570380 NKX2-6A6NCS4 301 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 LRRC53A6NM62 1247 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 ASNA1O43681 348 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 TOXO94900 526 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 EPOP01588 193 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 ATP1B2P14415 290 aaPredicted RBP9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 CD68P34810 354 aaPredicted RBP9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 GRIA3P42263 894 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 XIAPP98170 497 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 ZNF33BQ06732 778 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 RPA4Q13156 261 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 PCOLCEQ15113 449 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 SLC1A5Q15758 541 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 TMEM198Q66K66 360 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 NEK10Q6ZWH5 1172 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 SIAH3Q8IW03 269 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 MAP7D3Q8IWC1 876 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 SPATA3Q8NHX4 192 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 TEKT5Q96M29 485 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 ZNF285Q96NJ3 590 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 TRIM51Q9BSJ1 452 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 HES7Q9BYE0 225 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 THAP2Q9H0W7 228 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 FAM96AQ9H5X1 160 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 ZNF304Q9HCX3 659 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 ENAMQ9NRM1 1142 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 ZNF282Q9UDV7 671 aaPredicted RBP9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 FAM153AQ9UHL3 310 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 PLAGL1Q9UM63 463 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 TDRKHQ9Y2W6 561 aaKnown RBP9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 ARL5AQ9Y689 179 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 COL6A5A8TX70 2615 aa9.94□□□□□ -0.82
CTDNEP1-202ENST00000570380 DNAJC13O75165 2243 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 IGLV3-12A0A075B6K2 115 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 FITM1A5D6W6 292 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 ASPDHA6ND91 283 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 MYO1FO00160 1098 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 TTI1O43156 1089 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 ZWINTO95229 277 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 MLYCDO95822 493 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 TSPAN12O95859 305 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 HOXD4P09016 255 aaPredicted RBP9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 RALBP11234 206 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 KDELR1P24390 212 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 CXCR2P25025 360 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 PTPN3P26045 913 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 ACADLP28330 430 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 MSX1P28360 303 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 PRKCIP41743 596 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 EMP2P54851 167 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 UBE2HP62256 183 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 KIR2DS3Q14952 304 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 PDK1Q15118 436 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 FAM214AQ32MH5 1076 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 TCTE1Q5JU00 501 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 NPNTQ6UXI9 565 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 APTXQ7Z2E3 356 aaKnown RBP9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 FGD2Q7Z6J4 655 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 MARVELD2Q8N4S9 558 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 TTC29Q8NA56 475 aaPredicted RBP9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 OR4K2Q8NGD2 314 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 LILRB4Q8NHJ6 448 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 RAPGEF5Q92565 580 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 ARSGQ96EG1 525 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 FRMD6Q96NE9 622 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 OLFM3Q96PB7 478 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 SIGLEC12Q96PQ1 595 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 KLHL1Q9NR64 748 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 RIC8BQ9NVN3 520 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 ZNF358Q9NW07 568 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 DNAJB12Q9NXW2 375 aaKnown RBP9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 AIPL1Q9NZN9 384 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 CRLS1Q9UJA2 301 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 ASF1AQ9Y294 204 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 ASB1Q9Y576 335 aa9.93□□□□□ -0.82
CTDNEP1-202ENST00000570380 HEATR5BQ9P2D3 2071 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 FBN1P35555 2871 aaKnown RBP9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 LOC102723996A0A087X1L8 192 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 HYKKA2RU49 373 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 LRRC10BA6NIK2 292 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 FAM90A27PA6NNH2 459 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 IDSB3KWA1 339 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 PRRG2O14669 202 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 PROM1O43490 865 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 SKILP12757 684 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 NFKB1P19838 968 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 ST13P50502 369 aaKnown RBP9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 MYBPHQ13203 477 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 ZC3H12BQ5HYM0 836 aaKnown RBP9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 WASHC2DQ5SRD0 308 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 SLC9A4Q6AI14 798 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 ZNF449Q6P9G9 518 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 FIGLAQ6QHK4 219 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms