RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ZNF638Q14966 1978 aaKnown RBP7.04□□□□□ -1.28
CNOT1-222ENST00000570139 C17orf113A0A1B0GUU1 675 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 AHRRA9YTQ3 701 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 EEF2KO00418 725 aaKnown RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 LDLRAD4O15165 306 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 TEX28O15482 410 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 TTI1O43156 1089 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 VNN2O95498 520 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 LATS1O95835 1130 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 GLUD1P00367 558 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 KRT10P13645 584 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 PKMP14618 531 aaKnown RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 CDC25CP30307 473 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 HOXC13P31276 330 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 FMO4P31512 558 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 ATP5C1P36542 298 aaKnown RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 MSH2P43246 934 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 TPI1P60174 286 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 VSNL1P62760 191 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 COG7P83436 770 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 OTUD4Q01804 1114 aaKnown RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 ABHD18Q0P651 414 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 TAF10Q12962 218 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 IL13RA2Q14627 380 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 OASLQ15646 514 aaKnown RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 AP5B1Q2VPB7 878 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 PPP6R3Q5H9R7 873 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 SPDYCQ5MJ68 293 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 UBAP2Q5T6F2 1119 aaKnown RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 KAZNQ674X7 775 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 TXNRD3NBQ6F5E7 133 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 AADACL2Q6P093 401 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 CCNI2Q6ZMN8 369 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 GSTA5Q7RTV2 222 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 TMCO2Q7Z6W1 182 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 SCD5Q86SK9 330 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 LRRC49Q8IUZ0 686 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 UNC45BQ8IWX7 931 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 LAS2Q8IYD9 372 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 ALLCQ8N6M5 410 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 CCDC185Q8N715 623 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 CAVIN3Q969G5 261 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 AZIN2Q96A70 460 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 FUBP1Q96AE4 644 aaKnown RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 LRRC45Q96CN5 670 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 SNF8Q96H20 258 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 PRR11Q96HE9 360 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 PGAM5Q96HS1 289 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 ABHD8Q96I13 439 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 BTN2A3PQ96KV6 586 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 PPP1R2P1Q96PQ5 205 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 CSPG4P5Q96PW8 444 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 GCNAQ96QF7 691 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 TGS1Q96RS0 853 aaKnown RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 HEMGNQ9BXL5 484 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 HDHD5Q9BXW7 423 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 TKTL2Q9H0I9 626 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 PLEKHA4Q9H4M7 779 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 CATSPERBQ9H7T0 1116 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 VIPAS39Q9H9C1 493 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 USP29Q9HBJ7 922 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 PCDH9Q9HC56 1237 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 EPB41L5Q9HCM4 733 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 AKIP1Q9NQ31 210 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 MARCH4Q9P2E8 410 aaPredicted RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 CPSF2Q9P2I0 782 aaKnown RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 ZNF148Q9UQR1 794 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 SESN1Q9Y6P5 492 aa7.03□□□□□ -1.28
CNOT1-222ENST00000570139 KIAA0100Q14667 2235 aaKnown RBP7.03□□□□□ -1.28
CNOT1-222ENST00000570139 SYNJ2BP-COX16A0A087WUM0 186 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 BCLAF3A2AJT9 711 aaKnown RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 A8MV72 311 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 KCNU1A8MYU2 1149 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 A8MZ25 164 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 AP4M1O00189 453 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 ADAM12O43184 909 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 PROM1O43490 865 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 ADAM20O43506 726 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 FOXS1O43638 330 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 NCR1O76036 304 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 CXCL14O95715 111 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 IGLV3-27P01718 113 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 RHOP08100 348 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 CD48P09326 243 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 QDPRP09417 244 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 HOXB9P17482 250 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 IL4RP24394 825 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 DDX6P26196 483 aaKnown RBP eCLIP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 KLRC2P26717 231 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 CA8P35219 290 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 EIF3EP60228 445 aaKnown RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 B4GALNT1Q00973 533 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 TWF1Q12792 350 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 GPS2Q13227 327 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 BMPR2Q13873 1038 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 DPYSQ14117 519 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 IRF3Q14653 427 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 PAFAH1B3Q15102 231 aaKnown RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 PDK1Q15118 436 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 C10orf120Q5SQS8 335 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms