RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 GMPRP36959 345 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 ABATP80404 500 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 SETDB1Q15047 1291 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 PCBP2Q15366 365 aaKnown RBP eCLIP22.7■■□□□ 1.224e-6■■■■□ 22.3
RAB40C-212ENST00000569575 ZYG11AQ6WRX3 759 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 LRRC56Q8IYG6 542 aaPredicted RBP22.7■■□□□ 1.22
RAB40C-212ENST00000569575 SGPP1Q9BX95 441 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 TBC1D10AQ9BXI6 508 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 C1QTNF3Q9BXJ4 246 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 ABCG4Q9H172 646 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 LRRN3Q9H3W5 708 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 KCNK9Q9NPC2 374 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 WWOXQ9NZC7 414 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 CPSF2Q9P2I0 782 aaKnown RBP22.7■■□□□ 1.22
RAB40C-212ENST00000569575 EMCNQ9ULC0 261 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 ZNF292O60281 2723 aa22.7■■□□□ 1.22
RAB40C-212ENST00000569575 PCM1Q15154 2024 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 OR6C74A6NCV1 312 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 UBXN8O00124 270 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 SPAG7O75391 227 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 RFPL3O75679 317 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 STK16O75716 305 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 TOP3BO95985 862 aaKnown RBP22.69■■□□□ 1.22
RAB40C-212ENST00000569575 SBK3P0C264 359 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 CD1CP29017 333 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 PLA2G5P39877 138 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 OR1D5P58170 312 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 DNAJB13P59910 316 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 SLC5A12Q1EHB4 618 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 PERM1Q5SV97 790 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 LCTLQ6UWM7 567 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 LRRC70Q7Z2Q7 622 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 CCDC63Q8NA47 563 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 CD244Q9BZW8 370 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 NKIRAS1Q9NYS0 192 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 COPG2Q9UBF2 871 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 APOBEC2Q9Y235 224 aaKnown RBP22.69■■□□□ 1.22
RAB40C-212ENST00000569575 MYO15AQ9UKN7 3530 aa22.69■■□□□ 1.22
RAB40C-212ENST00000569575 ASXL3Q9C0F0 2248 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 RP1P56715 2156 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 TMX2-CTNND1H3BSU7 103 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 NTN3O00634 580 aaPredicted RBP22.68■■□□□ 1.22
RAB40C-212ENST00000569575 BIRC5O15392 142 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 PRICKLE3O43900 615 aaPredicted RBP22.68■■□□□ 1.22
RAB40C-212ENST00000569575 C9P02748 559 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 RPA3P35244 121 aaPredicted RBP22.68■■□□□ 1.22
RAB40C-212ENST00000569575 SLC6A12P48065 614 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 PFKFB4Q16877 469 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 TTMPQ5BVD1 217 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 C16orf46Q6P387 395 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 TMEM71Q6P5X7 295 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 CACTIN-AS1Q8N1I8 211 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 LMNTD1Q8N9Z9 388 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 LINC01555Q8NAE3 123 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 GRAMD1AQ96CP6 724 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 FAM111AQ96PZ2 611 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 INTS7Q9NVH2 962 aaKnown RBP22.68■■□□□ 1.22
RAB40C-212ENST00000569575 GPRC5BQ9NZH0 403 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 PDP2Q9P2J9 529 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 KCNE2Q9Y6J6 123 aa22.68■■□□□ 1.22
RAB40C-212ENST00000569575 MN1Q10571 1320 aaPredicted RBP22.67■■□□□ 1.22
RAB40C-212ENST00000569575 TMEM120BA0PK00 339 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 H3BQF6 201 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 BTN3A3O00478 584 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 KATNA1O75449 491 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 DKK1O94907 266 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 CREB1P16220 341 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 IMPDH1P20839 514 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 ETV4P43268 484 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 PCDH1Q08174 1060 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 NAE1Q13564 534 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 TRA2AQ13595 282 aaKnown RBP eCLIP22.67■■□□□ 1.22
RAB40C-212ENST00000569575 PTCHD3Q3KNS1 767 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 SPNS2Q8IVW8 549 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 ARFGAP2Q8N6H7 521 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 OR4D9Q8NGE8 314 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 GFM1Q96RP9 751 aaKnown RBP22.67■■□□□ 1.22
RAB40C-212ENST00000569575 XKR8Q9H6D3 395 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 OXSMQ9NWU1 459 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 ACTR10Q9NZ32 417 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 OGFRQ9NZT2 677 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 ANKMY1Q9P2S6 941 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 POMT2Q9UKY4 750 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 PLAGL1Q9UM63 463 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 KLK4Q9Y5K2 254 aa22.67■■□□□ 1.22
RAB40C-212ENST00000569575 UNC13CQ8NB66 2214 aa22.66■■□□□ 1.22
RAB40C-212ENST00000569575 NCF1BA6NI72 391 aaPredicted RBP22.66■■□□□ 1.22
RAB40C-212ENST00000569575 NCF1CA8MVU1 366 aaPredicted RBP22.66■■□□□ 1.22
RAB40C-212ENST00000569575 G3V2L1 256 aa22.66■■□□□ 1.22
RAB40C-212ENST00000569575 TAPBPO15533 448 aa22.66■■□□□ 1.22
RAB40C-212ENST00000569575 DLX3O60479 287 aa22.66■■□□□ 1.22
RAB40C-212ENST00000569575 RPLP0P05388 317 aaKnown RBP22.66■■□□□ 1.22
RAB40C-212ENST00000569575 DHRS4L1P0CG22 281 aa22.66■■□□□ 1.22
RAB40C-212ENST00000569575 NCF1P14598 390 aaPredicted RBP22.66■■□□□ 1.22
RAB40C-212ENST00000569575 TBPL1P62380 186 aa22.66■■□□□ 1.22
RAB40C-212ENST00000569575 HERVK_113P63132 956 aa22.66■■□□□ 1.22
RAB40C-212ENST00000569575 RELAQ04206 551 aa22.66■■□□□ 1.22
RAB40C-212ENST00000569575 PRDX1Q06830 199 aaKnown RBP22.66■■□□□ 1.22
RAB40C-212ENST00000569575 ZNF761Q86XN6 746 aaPredicted RBP22.66■■□□□ 1.22
RAB40C-212ENST00000569575 KMT5CQ86Y97 462 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms