RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 DUSP3P51452 185 aaPredicted RBP11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 CLDN6P56747 220 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 NAA20P61599 178 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 INSM1Q01101 510 aaPredicted RBP11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 TRAP1Q12931 704 aaKnown RBP11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 CEACAM7Q14002 265 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 SEPT6Q14141 434 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 MMEL1Q495T6 779 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 C6orf132Q5T0Z8 1188 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 HECTD2Q5U5R9 776 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 LPCAT4Q643R3 524 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 NXNQ6DKJ4 435 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 FAM45BPQ6NSW5 357 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 CNSTQ6PJW8 725 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 SLC30A9Q6PML9 568 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 ZNF765Q7L2R6 523 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 HEATR4Q86WZ0 1026 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 TICAM1Q8IUC6 712 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 NRSN1Q8IZ57 195 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 FAM45AQ8TCE6 357 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 SCAMP4Q969E2 229 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 EID2BQ96D98 161 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 DUS3LQ96G46 650 aaKnown RBP11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 PDXPQ96GD0 296 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 LRGUKQ96M69 825 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 CATSPER2Q96P56 530 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 EPB41L1Q9H4G0 881 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 SUCOQ9UBS9 1254 aaKnown RBP11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 CD84Q9UIB8 345 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 LRP4O75096 1905 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 MYLKQ15746 1914 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 PRSS51A0A1B0GVH4 220 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 CCDC78A2IDD5 438 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 TMEM8BA6NDV4 472 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 EIF4E1BA6NMX2 242 aaKnown RBP11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 A8MT66 165 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 SORBS2O94875 1100 aaKnown RBP11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 CEACAM5P06731 702 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 UBTFL6P0CB48 400 aaPredicted RBP11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 JUPP14923 745 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 HLA-DPA1P20036 260 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 CHRNA4P43681 627 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 CCR10P46092 362 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 CDK3Q00526 305 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 PEX6Q13608 980 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 CSHL1Q14406 222 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 ZNF460Q14592 562 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 PDCD2Q16342 344 aaPredicted RBP11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 RNF220Q5VTB9 566 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 KDELC2Q7Z4H8 507 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 SLC35F3Q8IY50 421 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 OR13J1Q8NGT2 312 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 AP2M1Q96CW1 435 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 ASB9Q96DX5 294 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 OLFM1Q99784 485 aa11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 PAPOLBQ9NRJ5 636 aaKnown RBP11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 PHPT1Q9NRX4 125 aaPredicted RBP11.32□□□□□ -0.6
SNAPC5-208ENST00000568875 URB1O60287 2271 aaKnown RBP11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 C1orf232A0A0U1RR37 186 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 SMIM31A0A1B0GVY4 71 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 CCDC189A1A4V9 331 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 TRABD2BA6NFA1 517 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 UBDO15205 165 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 S1PR4O95977 384 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 FGF1P05230 155 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 JUNP05412 331 aaKnown RBP11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 FGF4P08620 206 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 PABPC4LP0CB38 370 aaKnown RBP11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 CCDC166P0CW27 439 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 XRCC1P18887 633 aaPredicted RBP11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 GPR1P46091 355 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 SPINT3P49223 89 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 CHN2P52757 468 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 AQP4P55087 323 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 ROR2Q01974 943 aaKnown RBP11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 FOLH1Q04609 750 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 TARDBPQ13148 414 aaKnown RBP eCLIP11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 GALNT3Q14435 633 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 PDK3Q15120 406 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 ST3GAL2Q16842 350 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 LIN52Q52LA3 116 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 RBM20Q5T481 1227 aaKnown RBP11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 HES3Q5TGS1 186 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 TMEM198Q66K66 360 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 RAET1GQ6H3X3 334 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 ADAMTSL4Q6UY14 1074 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 CUZD1Q86UP6 607 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 GKN2Q86XP6 184 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 ZNF483Q8TF39 744 aaPredicted RBP11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 NCSTNQ92542 709 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 SCARF2Q96GP6 870 aaPredicted RBP11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 SLC25A23Q9BV35 468 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 RIOK2Q9BVS4 552 aaKnown RBP11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 TMEM168Q9H0V1 697 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 MAGEE1Q9HCI5 957 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 CYP4F12Q9HCS2 524 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 RIMS3Q9UJD0 308 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 SLC17A4Q9Y2C5 497 aa11.31□□□□□ -0.6
SNAPC5-208ENST00000568875 PRSS38A1L453 326 aa11.3□□□□□ -0.6
SNAPC5-208ENST00000568875 CPED1A4D0V7 1026 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms