RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 FOXR1Q6PIV2 292 aa11.98□□□□□ -0.49
RNF40-211ENST00000567365 UBE2R2Q712K3 238 aaPredicted RBP11.98□□□□□ -0.49
RNF40-211ENST00000567365 CTAGE3PQ8IX95 158 aa11.98□□□□□ -0.49
RNF40-211ENST00000567365 GSPT2Q8IYD1 628 aaKnown RBP11.98□□□□□ -0.49
RNF40-211ENST00000567365 OR2A1Q8NGT9 310 aa11.98□□□□□ -0.49
RNF40-211ENST00000567365 ZNF480Q8WV37 535 aa11.98□□□□□ -0.49
RNF40-211ENST00000567365 SKA2Q8WVK7 121 aaPredicted RBP11.98□□□□□ -0.49
RNF40-211ENST00000567365 SLC44A1Q8WWI5 657 aa11.98□□□□□ -0.49
RNF40-211ENST00000567365 ISL2Q96A47 359 aa11.98□□□□□ -0.49
RNF40-211ENST00000567365 UBXN10Q96LJ8 280 aa11.98□□□□□ -0.49
RNF40-211ENST00000567365 CAB39LQ9H9S4 337 aa11.98□□□□□ -0.49
RNF40-211ENST00000567365 A0A087WV48 116 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 A0A0J9YY10 115 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 RIPK2O43353 540 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 HCRTR1O43613 425 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 ZBTB14O43829 449 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 SLU7O95391 586 aaKnown RBP11.97□□□□□ -0.49
RNF40-211ENST00000567365 CDH3P22223 829 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 IMPA1P29218 277 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 OAS2P29728 719 aaKnown RBP11.97□□□□□ -0.49
RNF40-211ENST00000567365 PHBP35232 272 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 DEKP35659 375 aaKnown RBP11.97□□□□□ -0.49
RNF40-211ENST00000567365 EIF2S3P41091 472 aaKnown RBP11.97□□□□□ -0.49
RNF40-211ENST00000567365 MAPK10P53779 464 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 KCNAB1Q14722 419 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 C19orf48Q6RUI8 117 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 TRMT10CQ7L0Y3 403 aaKnown RBP11.97□□□□□ -0.49
RNF40-211ENST00000567365 TRIM73Q86UV7 250 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 FAM129CQ86XR2 697 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 FAM20CQ8IXL6 584 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 C2orf73Q8N5S3 287 aaPredicted RBP11.97□□□□□ -0.49
RNF40-211ENST00000567365 ZNF501Q96CX3 271 aaPredicted RBP11.97□□□□□ -0.49
RNF40-211ENST00000567365 TEFMQ96QE5 360 aaKnown RBP11.97□□□□□ -0.49
RNF40-211ENST00000567365 DHRS4Q9BTZ2 278 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 ASPSCR1Q9BZE9 553 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 DERL2Q9GZP9 239 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 PARVBQ9HBI1 364 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 SYTL2Q9HCH5 934 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 FAM60AQ9NP50 221 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 ENAMQ9NRM1 1142 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 SLC39A1Q9NY26 324 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 SLC39A10Q9ULF5 831 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 RAXQ9Y2V3 346 aa11.97□□□□□ -0.49
RNF40-211ENST00000567365 TMEM184BQ9Y519 407 aaPredicted RBP11.97□□□□□ -0.49
RNF40-211ENST00000567365 SEC16AO15027 2179 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 ISM1B1AKI9 464 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 POLR1CO15160 346 aaPredicted RBP11.96□□□□□ -0.49
RNF40-211ENST00000567365 PHGDHO43175 533 aaKnown RBP11.96□□□□□ -0.49
RNF40-211ENST00000567365 DLGAP3O95886 979 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 EBLN1P0CF75 366 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 SLC35E2BP0CK96 405 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 CD82P27701 267 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 PSMB5P28074 263 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 GCAP28676 217 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 GMPRP36959 345 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 HSD17B2P37059 387 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 MAGEA12P43365 314 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 PNLIPRP1P54315 467 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 PCBP4P57723 403 aaKnown RBP11.96□□□□□ -0.49
RNF40-211ENST00000567365 RAB10P61026 200 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 YBX1P67809 324 aaKnown RBP11.96□□□□□ -0.49
RNF40-211ENST00000567365 TUBB4BP68371 445 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 IL11RAQ14626 422 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 USP10Q14694 798 aaKnown RBP11.96□□□□□ -0.49
RNF40-211ENST00000567365 DCAF12Q5T6F0 453 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 CEACAM20Q6UY09 585 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 MYO1HQ8N1T3 1032 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 NKAPQ8N5F7 415 aaKnown RBP11.96□□□□□ -0.49
RNF40-211ENST00000567365 C19orf47Q8N9M1 422 aaKnown RBP11.96□□□□□ -0.49
RNF40-211ENST00000567365 OR2L3Q8NG85 312 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.96□□□□□ -0.49
RNF40-211ENST00000567365 SMPDL3AQ92484 453 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 SLC22A18Q96BI1 424 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 TSPAN17Q96FV3 270 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 CCDC138Q96M89 665 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 FCRL4Q96PJ5 515 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 OR6C1Q96RD1 312 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 ZPBPQ9BS86 351 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 GPAMQ9HCL2 828 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 STOX2Q9P2F5 926 aaPredicted RBP11.96□□□□□ -0.49
RNF40-211ENST00000567365 TXNDC16Q9P2K2 825 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 LNPEPQ9UIQ6 1025 aa11.96□□□□□ -0.49
RNF40-211ENST00000567365 NOVA2Q9UNW9 492 aaKnown RBP11.96□□□□□ -0.49
RNF40-211ENST00000567365 BAHCC1Q9P281 2608 aa11.96□□□□□ -0.5
RNF40-211ENST00000567365 IGKV1-8A0A0C4DH67 115 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 CDC7O00311 574 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 TIAF1O95411 115 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 ALDOAP04075 364 aaKnown RBP11.95□□□□□ -0.5
RNF40-211ENST00000567365 ENO2P09104 434 aaPredicted RBP11.95□□□□□ -0.5
RNF40-211ENST00000567365 STMN1P16949 149 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 ZNF28P17035 718 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 CYP2A7P20853 494 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 MAGP20916 626 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 SAT1P21673 171 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 PMS2P54278 862 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 AP1S2P56377 157 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 VSNL1P62760 191 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 ACY1Q03154 408 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 DLG1Q12959 904 aa11.95□□□□□ -0.5
RNF40-211ENST00000567365 CLN3Q13286 438 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms