RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 NEK2P51955 445 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 IL1RL1Q01638 556 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 CAMK2BQ13554 666 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 GTF2H3Q13889 308 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 SYT16Q17RD7 645 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 TTLL9Q3SXZ7 439 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 USP39Q53GS9 565 aaKnown RBP15.29■□□□□ 0.04
COMMD4-215ENST00000566843 FAHD1Q6P587 224 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 SBSNQ6UWP8 590 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 AHSA2Q719I0 299 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 SLC46A3Q7Z3Q1 461 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 ADAMTSL2Q86TH1 951 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 SPATA2LQ8IUW3 424 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-215ENST00000566843 OR10Q1Q8NGQ4 319 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 MGME1Q9BQP7 344 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 C6orf62Q9GZU0 229 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-215ENST00000566843 PLXNA3P51805 1871 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 C2orf81A6NN90 581 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 PCDHGA12O60330 932 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 CCNKO75909 580 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 GLUD1P00367 558 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 MAGEA11P43364 429 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 MAPKAPK2P49137 400 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 TSPY1Q01534 308 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 MLIPQ5VWP3 458 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 RSBN1Q5VWQ0 802 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-215ENST00000566843 RAP1GAP2Q684P5 730 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 OVOS1Q6IE37 1185 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 PRR23CQ6ZRP0 262 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 HEATR4Q86WZ0 1026 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 THEM5Q8N1Q8 247 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 TMEM132CQ8N3T6 1108 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 ZNF784Q8NCA9 323 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-215ENST00000566843 DNASE1L2Q92874 299 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 SNX18Q96RF0 628 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 LRTM1Q9HBL6 345 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 PLCXD1Q9NUJ7 323 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 PDP1Q9P0J1 537 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-215ENST00000566843 ZMYM5Q9UJ78 669 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 PCDHGA3Q9Y5H0 932 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 GPR182O15218 404 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 TAPBPO15533 448 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 IDH3BO43837 385 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 ESR1P03372 595 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 S100BP04271 92 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-215ENST00000566843 MYCLP1P12525 358 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-215ENST00000566843 LPOP22079 712 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-215ENST00000566843 RPP38P78345 283 aaKnown RBP15.28■□□□□ 0.04
COMMD4-215ENST00000566843 CREMQ03060 361 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 CCDC103Q8IW40 242 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 ENTHD1Q8IYW4 607 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 KBTBD8Q8NFY9 601 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 UBE2FQ969M7 185 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 TINF2Q9BSI4 451 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 ZBED2Q9BTP6 218 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 KRT84Q9NSB2 600 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 FKBP14Q9NWM8 211 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 FBXL12Q9NXK8 326 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 QPCTLQ9NXS2 382 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 PSORS1C1Q9UIG5 152 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 DHRS7Q9Y394 339 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 PCDHGB6Q9Y5F9 930 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 TTC3P53804 2025 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 KMOO15229 486 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 FFAR2O15552 330 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 HOXC11O43248 304 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-215ENST00000566843 AOC2O75106 756 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 PRLP01236 227 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 DBTP11182 482 aaKnown RBP15.28■□□□□ 0.04
COMMD4-215ENST00000566843 MC4RP32245 332 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 S100A5P33763 92 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 DEFA1P59665 94 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 DEFA3P59666 94 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 HMGCS1Q01581 520 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 ELP6Q0PNE2 266 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 CRHR2Q13324 411 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 FAM171A1Q5VUB5 890 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 ZNF551Q7Z340 670 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-215ENST00000566843 CIR1Q86X95 450 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-215ENST00000566843 OR6F1Q8NGZ6 308 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 P2RY12Q9H244 342 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 CCDC177Q9NQR7 707 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-215ENST00000566843 RASSF1Q9NS23 344 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 ELOVL2Q9NXB9 296 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 RAPGEFL1Q9UHV5 662 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 FKBPLQ9UIM3 349 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 MKLN1Q9UL63 735 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 N6AMT1Q9Y5N5 214 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 PEX16Q9Y5Y5 336 aa15.28■□□□□ 0.04
COMMD4-215ENST00000566843 MYO1GB0I1T2 1018 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 E5RI56 91 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 SCO2O43819 266 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 B3GAT3O94766 335 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 MED26O95402 600 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 KRT8P05787 483 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 ALOX12P18054 663 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 CXCR2P25025 360 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 PTGER3P43115 390 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 SREBF2Q12772 1141 aa15.27■□□□□ 0.04
COMMD4-215ENST00000566843 NPRL3Q12980 569 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms