RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 KRT4P19013 534 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 CD1CP29017 333 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 IMPA1P29218 277 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 PNLIPRP1P54315 467 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 E2F1Q01094 437 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 TSTA3Q13630 321 aaPredicted RBP11.11□□□□□ -0.63
KARS-207ENST00000566560 ACAP2Q15057 778 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 TGFBIQ15582 683 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 TECRLQ5HYJ1 363 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 ARMC6Q6NXE6 501 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 IRGCQ6NXR0 463 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 ISCA2Q86U28 154 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 LCA5Q86VQ0 697 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 GPSM1Q86YR5 675 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 SYTL1Q8IYJ3 562 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 OR2L8Q8NGY9 312 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 WDR48Q8TAF3 677 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 STAG3L4Q8TBR4 150 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 SCYL1Q96KG9 808 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 CCDC138Q96M89 665 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 GPR78Q96P69 363 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 EGFL8Q99944 293 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 NUDT22Q9BRQ3 303 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 RDH14Q9HBH5 336 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 ZNF358Q9NW07 568 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 DLL3Q9NYJ7 618 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 NUDT4Q9NZJ9 180 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 OR6C2Q9NZP2 312 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 SENP1Q9P0U3 644 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 STOX2Q9P2F5 926 aaPredicted RBP11.11□□□□□ -0.63
KARS-207ENST00000566560 XPR1Q9UBH6 696 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 ATXN7L1Q9ULK2 861 aaPredicted RBP11.11□□□□□ -0.63
KARS-207ENST00000566560 SPTBN2O15020 2390 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 SPTBN4Q9H254 2564 aa11.11□□□□□ -0.63
KARS-207ENST00000566560 MN1Q10571 1320 aaPredicted RBP11.1□□□□□ -0.63
KARS-207ENST00000566560 ADAMTS20P59510 1910 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 PIPSLA2A3N6 862 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 SYCE1LA8MT33 242 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 C2orf74A8MZ97 194 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 BTN3A3O00478 584 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 NTN3O00634 580 aaPredicted RBP11.1□□□□□ -0.63
KARS-207ENST00000566560 COPEO14579 308 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 ANXA5P08758 320 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 CHRM5P08912 532 aaPredicted RBP11.1□□□□□ -0.63
KARS-207ENST00000566560 RBP1P09455 135 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 POLR2CP19387 275 aaPredicted RBP11.1□□□□□ -0.63
KARS-207ENST00000566560 SOX11P35716 441 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 HSD17B2P37059 387 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 GFERP55789 205 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 PPP1CAP62136 330 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 TBPL1P62380 186 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 CDKL1Q00532 357 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 ARHGAP19Q14CB8 494 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 CYP2A13Q16696 494 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 CLPPQ16740 277 aaPredicted RBP11.1□□□□□ -0.63
KARS-207ENST00000566560 DHRS13Q6UX07 377 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 RBM44Q6ZP01 1051 aaKnown RBP11.1□□□□□ -0.63
KARS-207ENST00000566560 USP53Q70EK8 1073 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 SLCO6A1Q86UG4 719 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 ADGRF3Q8IZF5 1079 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 C2orf73Q8N5S3 287 aaPredicted RBP11.1□□□□□ -0.63
KARS-207ENST00000566560 LMNTD1Q8N9Z9 388 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 LINC01555Q8NAE3 123 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 PPFIBP2Q8ND30 876 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 RHEBL1Q8TAI7 183 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 HMGCLL1Q8TB92 370 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 ZNF480Q8WV37 535 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 ATL1Q8WXF7 558 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 NCSTNQ92542 709 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 PGM2Q96G03 612 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 APOPT1Q96IL0 206 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 SMC6Q96SB8 1091 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 ATOH8Q96SQ7 321 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 IQCGQ9H095 443 aaKnown RBP11.1□□□□□ -0.63
KARS-207ENST00000566560 STMN4Q9H169 189 aaPredicted RBP11.1□□□□□ -0.63
KARS-207ENST00000566560 MRPL46Q9H2W6 279 aaKnown RBP11.1□□□□□ -0.63
KARS-207ENST00000566560 VIPAS39Q9H9C1 493 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 HRASLS2Q9NWW9 162 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 ACTR10Q9NZ32 417 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 WWOXQ9NZC7 414 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 CD274Q9NZQ7 290 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 KLHL3Q9UH77 587 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 DMXL1Q9Y485 3027 aa11.1□□□□□ -0.63
KARS-207ENST00000566560 UBXN8O00124 270 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 CAPN5O15484 640 aaPredicted RBP11.09□□□□□ -0.63
KARS-207ENST00000566560 DKK1O94907 266 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 GSTA1P08263 222 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 UGT2B7P16662 529 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 PEBP1P30086 187 aaKnown RBP11.09□□□□□ -0.63
KARS-207ENST00000566560 CLDN6P56747 220 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 INSM1Q01101 510 aaPredicted RBP11.09□□□□□ -0.63
KARS-207ENST00000566560 SLC18A2Q05940 514 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 FASTKQ14296 549 aaKnown RBP11.09□□□□□ -0.63
KARS-207ENST00000566560 PUM1Q14671 1186 aaKnown RBP eCLIP11.09□□□□□ -0.634e-7■□□□□ 9.7
KARS-207ENST00000566560 KIR2DS3Q14952 304 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 N4BP2L1Q5TBK1 243 aaPredicted RBP11.09□□□□□ -0.63
KARS-207ENST00000566560 HES3Q5TGS1 186 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 WDR74Q6RFH5 385 aaPredicted RBP11.09□□□□□ -0.63
KARS-207ENST00000566560 AGTRAPQ6RW13 159 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 FAM92BQ6ZTR7 304 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms