RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 SNX7Q9UNH6 387 aa14.09□□□□□ -0.15
FANCA-220ENST00000566409 PLCL2Q9UPR0 1127 aa14.09□□□□□ -0.15
FANCA-220ENST00000566409 AP1M2Q9Y6Q5 423 aa14.09□□□□□ -0.15
FANCA-220ENST00000566409 MDC1Q14676 2089 aaKnown RBP14.09□□□□□ -0.15
FANCA-220ENST00000566409 USP9XQ93008 2570 aaPredicted RBP14.08□□□□□ -0.16
FANCA-220ENST00000566409 A0A1W2PPV9 198 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 ARGFXA6NJG6 315 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 MKRN2OSH3BPM6 223 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 CES2O00748 559 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 ZSCAN9O15535 394 aaPredicted RBP14.08□□□□□ -0.16
FANCA-220ENST00000566409 KIF5CO60282 957 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 NRP2O60462 931 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 HBQ1P09105 142 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 PKMP14618 531 aaKnown RBP14.08□□□□□ -0.16
FANCA-220ENST00000566409 CHRM3P20309 590 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 ITGAXP20702 1163 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 CLCN7P51798 805 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 FOXL2P58012 376 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 FASTKQ14296 549 aaKnown RBP14.08□□□□□ -0.16
FANCA-220ENST00000566409 SF1Q15637 639 aaKnown RBP14.08□□□□□ -0.16
FANCA-220ENST00000566409 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.08□□□□□ -0.16
FANCA-220ENST00000566409 RNASEH2BQ5TBB1 312 aaKnown RBP14.08□□□□□ -0.16
FANCA-220ENST00000566409 FIGLAQ6QHK4 219 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 MCATQ8IVS2 390 aaKnown RBP14.08□□□□□ -0.16
FANCA-220ENST00000566409 ZBTB2Q8N680 514 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 OR2A1Q8NGT9 310 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 GIMAP7Q8NHV1 300 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 HMGCLL1Q8TB92 370 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 N4BP2L2Q92802 583 aaPredicted RBP14.08□□□□□ -0.16
FANCA-220ENST00000566409 SLC22A18Q96BI1 424 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 SLC7A5P2Q9GIP4 190 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 DDX47Q9H0S4 455 aaKnown RBP14.08□□□□□ -0.16
FANCA-220ENST00000566409 FBXO6Q9NRD1 293 aaPredicted RBP14.08□□□□□ -0.16
FANCA-220ENST00000566409 SLC22A11Q9NSA0 550 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 SAMD15Q9P1V8 674 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 SLC39A10Q9ULF5 831 aa14.08□□□□□ -0.16
FANCA-220ENST00000566409 ARHGEF33A8MVX0 844 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 H3BMM5 538 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 CTSVO60911 334 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 PAMP19021 973 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 ATP5DP30049 168 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 CASRP41180 1078 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 SLC1A2P43004 574 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 CSRP3P50461 194 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 KCNC4Q03721 635 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 CYP2A13Q16696 494 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 KLHL38Q2WGJ6 581 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 MSS51Q4VC12 460 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 TLDC1Q6P9B6 456 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 TTC23LQ6PF05 361 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 PPIL6Q8IXY8 311 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 GSDMBQ8TAX9 411 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 ZNF285Q96NJ3 590 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 ING2Q9H160 280 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 MLXIPLQ9NP71 852 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 INTS10Q9NVR2 710 aaKnown RBP14.07□□□□□ -0.16
FANCA-220ENST00000566409 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.07□□□□□ -0.16
FANCA-220ENST00000566409 ANAPC2Q9UJX6 822 aa14.07□□□□□ -0.16
FANCA-220ENST00000566409 DOCK10Q96BY6 2186 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 PFDN6O15212 129 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 PSIP1O75475 530 aaKnown RBP14.06□□□□□ -0.16
FANCA-220ENST00000566409 BANF1O75531 89 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 USP1O94782 785 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 HAUS5O94927 633 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 ATXN8OSP0DMR3 200 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 ERGP11308 486 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 AGXTP21549 392 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 MCM3P25205 808 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 IVDP26440 423 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 CCNFP41002 786 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 CCL11P51671 97 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 DCDP81605 110 aaKnown RBP14.06□□□□□ -0.16
FANCA-220ENST00000566409 MPP1Q00013 466 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 SLC9A5Q14940 896 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 MLIPQ5VWP3 458 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 MRPL14Q6P1L8 145 aaKnown RBP14.06□□□□□ -0.16
FANCA-220ENST00000566409 CYHR1Q6ZMK1 362 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 ASB18Q6ZVZ8 466 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 OR2L3Q8NG85 312 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 PROKR1Q8TCW9 393 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 GRK7Q8WTQ7 553 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 ZUFSPQ96AP4 578 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 MIPEPQ99797 713 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 RAB11FIP5Q9BXF6 653 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 CLMPQ9H6B4 373 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 ENAMQ9NRM1 1142 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 C20orf96Q9NUD7 363 aaPredicted RBP14.06□□□□□ -0.16
FANCA-220ENST00000566409 PCYOX1Q9UHG3 505 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 KLK4Q9Y5K2 254 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 MAD1L1Q9Y6D9 718 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 FAM169AQ9Y6X4 670 aa14.06□□□□□ -0.16
FANCA-220ENST00000566409 UTP20O75691 2785 aaKnown RBP14.05□□□□□ -0.16
FANCA-220ENST00000566409 GOLGA6L10A0A0M3HER8 536 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 CTAGE9A4FU28 777 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 TARM1B6A8C7 271 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 C9J4A7 227 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 CEACAM4O75871 244 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 TIAL1Q01085 375 aaKnown RBP eCLIP14.05□□□□□ -0.16
FANCA-220ENST00000566409 KLRB1Q12918 225 aa14.05□□□□□ -0.16
FANCA-220ENST00000566409 CUL1Q13616 776 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms