RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 BTBD10Q9BSF8 475 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 THAP2Q9H0W7 228 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 PARLQ9H300 379 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 MTHFD2LQ9H903 347 aaPredicted RBP1.69□□□□□ -2.14
SMG1-212ENST00000566328 SETD4Q9NVD3 440 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 GRIP1Q9Y3R0 1128 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 CMAHPQ9Y471 501 aa1.69□□□□□ -2.14
SMG1-212ENST00000566328 SYNJ1O43426 1573 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 EIF4G3O43432 1585 aaKnown RBP1.68□□□□□ -2.14
SMG1-212ENST00000566328 DNMBPQ6XZF7 1577 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 WRNQ14191 1432 aaPredicted RBP eCLIP1.68□□□□□ -2.14
SMG1-212ENST00000566328 PRG4Q92954 1404 aaPredicted RBP1.68□□□□□ -2.14
SMG1-212ENST00000566328 C2orf81A6NN90 581 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 PHF1O43189 567 aaPredicted RBP1.68□□□□□ -2.14
SMG1-212ENST00000566328 HS6ST1O60243 411 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 TRUB2O95900 331 aaKnown RBP1.68□□□□□ -2.14
SMG1-212ENST00000566328 EIF2S1P05198 315 aaKnown RBP1.68□□□□□ -2.14
SMG1-212ENST00000566328 SRPRAP08240 638 aaKnown RBP1.68□□□□□ -2.14
SMG1-212ENST00000566328 CDH2P19022 906 aaPredicted RBP1.68□□□□□ -2.14
SMG1-212ENST00000566328 TNFAIP3P21580 790 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 CLCN4P51793 760 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 KRT33BQ14525 404 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 ZNF74Q16587 644 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 ODF4Q2M2E3 257 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 TMEM198Q66K66 360 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 SARM1Q6SZW1 724 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 MCEMP1Q8IX19 187 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 OR4N5Q8IXE1 308 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 AFAP1Q8N556 730 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 TDRD5Q8NAT2 981 aaKnown RBP1.68□□□□□ -2.14
SMG1-212ENST00000566328 APOBEC4Q8WW27 367 aaKnown RBP1.68□□□□□ -2.14
SMG1-212ENST00000566328 POMGNT1Q8WZA1 660 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 ERLEC1Q96DZ1 483 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 OR2A14Q96R47 310 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 OR6C1Q96RD1 312 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 OVOL2Q9BRP0 275 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 LMF2Q9BU23 707 aaKnown RBP1.68□□□□□ -2.14
SMG1-212ENST00000566328 NYXQ9GZU5 481 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 ADNPQ9H2P0 1102 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 ASB8Q9H765 288 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 CHMP1AQ9HD42 196 aaPredicted RBP1.68□□□□□ -2.14
SMG1-212ENST00000566328 WSB2Q9NYS7 404 aaPredicted RBP1.68□□□□□ -2.14
SMG1-212ENST00000566328 PLCL2Q9UPR0 1127 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 COMMD10Q9Y6G5 202 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 CARMIL1Q5VZK9 1371 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 GRIN2BQ13224 1484 aa1.68□□□□□ -2.14
SMG1-212ENST00000566328 IGLV4-3A0A075B6K6 122 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 A0A1W2PPH5 198 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 PIP5K1CO60331 668 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 ZNF354AO60765 605 aaPredicted RBP1.67□□□□□ -2.14
SMG1-212ENST00000566328 SH3BGRLO75368 114 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 PTGER4P35408 488 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 XGP55808 180 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 NR1D2Q14995 579 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 HERC3Q15034 1050 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 TAB1Q15750 504 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 ACAD10Q6JQN1 1059 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 NHLRC1Q6VVB1 395 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 NUDT13Q86X67 352 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 RNF130Q86XS8 419 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 DIS3L2Q8IYB7 885 aaKnown RBP1.67□□□□□ -2.14
SMG1-212ENST00000566328 TEX11Q8IYF3 940 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 C11orf42Q8N5U0 333 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 UBAC1Q9BSL1 405 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 C16orf70Q9BSU1 422 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 YTHDF1Q9BYJ9 559 aaKnown RBP1.67□□□□□ -2.14
SMG1-212ENST00000566328 PANK2Q9BZ23 570 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 MTMR12Q9C0I1 747 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 SHARPINQ9H0F6 387 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 PLK3Q9H4B4 646 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 JPT2Q9H910 190 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 PDFQ9HBH1 243 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 WASH6PQ9NQA3 447 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 SERINC1Q9NRX5 453 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 GGA3Q9NZ52 723 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 RHCGQ9UBD6 479 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 LNPEPQ9UIQ6 1025 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 SYNJ2O15056 1496 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 TSPOAP1O95153 1857 aa1.67□□□□□ -2.14
SMG1-212ENST00000566328 PTPRGP23470 1445 aa1.66□□□□□ -2.14
SMG1-212ENST00000566328 ABCA10Q8WWZ4 1543 aa1.66□□□□□ -2.14
SMG1-212ENST00000566328 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.66□□□□□ -2.14
SMG1-212ENST00000566328 ENO4A6NNW6 628 aa1.66□□□□□ -2.14
SMG1-212ENST00000566328 SNAP91O60641 907 aa1.66□□□□□ -2.14
SMG1-212ENST00000566328 RSL1D1O76021 490 aaKnown RBP1.66□□□□□ -2.14
SMG1-212ENST00000566328 WDPCPO95876 746 aa1.66□□□□□ -2.14
SMG1-212ENST00000566328 LDHAP00338 332 aaKnown RBP1.66□□□□□ -2.14
SMG1-212ENST00000566328 THY1P04216 161 aa1.66□□□□□ -2.14
SMG1-212ENST00000566328 RPL35AP18077 110 aaKnown RBP1.66□□□□□ -2.14
SMG1-212ENST00000566328 CSTF2P33240 577 aaKnown RBP eCLIP1.66□□□□□ -2.14
SMG1-212ENST00000566328 MNDAP41218 407 aa1.66□□□□□ -2.14
SMG1-212ENST00000566328 LBX1P52954 281 aa1.66□□□□□ -2.14
SMG1-212ENST00000566328 PPIAP62937 165 aaKnown RBP1.66□□□□□ -2.14
SMG1-212ENST00000566328 PRAMEP78395 509 aa1.66□□□□□ -2.14
SMG1-212ENST00000566328 IRX4P78413 519 aa1.66□□□□□ -2.14
SMG1-212ENST00000566328 IKQ13123 557 aaPredicted RBP1.66□□□□□ -2.14
SMG1-212ENST00000566328 ZNF177Q13360 481 aaPredicted RBP1.66□□□□□ -2.14
SMG1-212ENST00000566328 CDH18Q13634 790 aa1.66□□□□□ -2.14
SMG1-212ENST00000566328 C2orf83Q53S99 150 aa1.66□□□□□ -2.14
SMG1-212ENST00000566328 HERC4Q5GLZ8 1057 aaPredicted RBP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms