RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 NFU1Q9UMS0 254 aa13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 MDC1Q14676 2089 aaKnown RBP13.36□□□□□ -0.27
HERPUD1-210ENST00000565966 A0A0J9YY10 115 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 TEX51A0A1B0GUA7 166 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 FAM95CA0A1B0GW59 222 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 KRT87PA6NCN2 255 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 RASGRF2O14827 1237 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 KIAA0754O94854 1291 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 CATP04040 527 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 MSL3P1P0C860 447 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 GP5P40197 560 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 RGS4P49798 205 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 TAS2R39P59534 338 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 ABHD18Q0P651 414 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 ILF2Q12905 390 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 SRSF6Q13247 344 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 PDAP1Q13442 181 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 GPR19Q15760 415 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 SLC5A12Q1EHB4 618 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 TEX35Q5T0J7 233 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 VASH2Q86V25 355 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 CTAGE3PQ8IX95 158 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 ESX1Q8N693 406 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 PPM1NQ8N819 430 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 LMNTD1Q8N9Z9 388 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 LINC01555Q8NAE3 123 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 ZSCAN1Q8NBB4 408 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 OR2L8Q8NGY9 312 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 FLVCR1-AS1Q8TAF5 88 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 ASB11Q8WXH4 323 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 VPS39Q96JC1 886 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 CPNE1Q99829 537 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 FANCEQ9HB96 536 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 LNPEPQ9UIQ6 1025 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 MTO1Q9Y2Z2 717 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 LOC400499M0QZD8 3231 aa13.35□□□□□ -0.27
HERPUD1-210ENST00000565966 GFYI3L273 518 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 TSPAN12O95859 305 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 MT-ND3P03897 115 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 PVRP15151 417 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 ZNF28P17035 718 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 SAT1P21673 171 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 PEBP1P30086 187 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 EFTUD2Q15029 972 aaKnown RBP eCLIP13.34□□□□□ -0.278e-9■■■■□ 19.7
HERPUD1-210ENST00000565966 LRRC8EQ6NSJ5 796 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 PWWP2BQ6NUJ5 590 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 TMEM207Q6UWW9 146 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 C6orf15Q6UXA7 325 aaPredicted RBP13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 C19orf47Q8N9M1 422 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 GALNT6Q8NCL4 622 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 OR9A1PQ8NGU1 263 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 DENND1AQ8TEH3 1009 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 LINGO1Q96FE5 620 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 TCTN2Q96GX1 697 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 RBBP8Q99708 897 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 EFHD1Q9BUP0 239 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 CHRNA10Q9GZZ6 450 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 KLHL25Q9H0H3 589 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 SPATA7Q9P0W8 599 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 TXNDC16Q9P2K2 825 aa13.34□□□□□ -0.27
HERPUD1-210ENST00000565966 FER1L5A0AVI2 2057 aa13.33□□□□□ -0.27
HERPUD1-210ENST00000565966 LOC101059948A0A1B0GTJ6 334 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 TMEM150CB9EJG8 249 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 MYO1CO00159 1063 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 FAM155BO75949 473 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 TIAF1O95411 115 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 CCNYL3P0C7X3 344 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 LIFP15018 202 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 PHBP35232 272 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 IL2P60568 153 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 RHDQ02161 417 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 NAB1Q13506 487 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 GRTP1Q5TC63 336 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 UBE2R2Q712K3 238 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 TRIM73Q86UV7 250 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 TMEM126BQ8IUX1 230 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 CEP97Q8IW35 865 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 MYO1HQ8N1T3 1032 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 C2orf73Q8N5S3 287 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 FBXO15Q8NCQ5 510 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 HMGCLL1Q8TB92 370 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 DLG3Q92796 817 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 KIAA1143Q96AT1 154 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 PKP4Q99569 1192 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 GPR22Q99680 433 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 FUT8Q9BYC5 575 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 SERTAD3Q9UJW9 196 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 RALYQ9UKM9 306 aaKnown RBP13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 PADI1Q9ULC6 663 aa13.33□□□□□ -0.28
HERPUD1-210ENST00000565966 IGSF10Q6WRI0 2623 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 ZBTB14O43829 449 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 PRICKLE3O43900 615 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 SCRG1O75711 98 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 FKBP9O95302 570 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 ACSL3O95573 720 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 NTRK1P04629 796 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 FAM153BP0C7A2 387 aa13.32□□□□□ -0.28
HERPUD1-210ENST00000565966 ERGP11308 486 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms