RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 ZMYND15Q9H091 742 aa16.1■□□□□ 0.17
RNF40-207ENST00000565931 CLCA2Q9UQC9 943 aa16.1■□□□□ 0.17
RNF40-207ENST00000565931 CFAP54Q96N23 3096 aa16.1■□□□□ 0.17
RNF40-207ENST00000565931 GOLGA4Q13439 2230 aaKnown RBP16.09■□□□□ 0.17
RNF40-207ENST00000565931 ISM1B1AKI9 464 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 RGS16O15492 202 aaPredicted RBP16.09■□□□□ 0.17
RNF40-207ENST00000565931 KIF1CO43896 1103 aaKnown RBP16.09■□□□□ 0.17
RNF40-207ENST00000565931 CSO75390 466 aaKnown RBP16.09■□□□□ 0.17
RNF40-207ENST00000565931 GSTA1P08263 222 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 RBP1P09455 135 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 MTHFD2P13995 350 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 UGT2B7P16662 529 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 OAS2P29728 719 aaKnown RBP16.09■□□□□ 0.17
RNF40-207ENST00000565931 CCKBRP32239 447 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 INHBCP55103 352 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 NAE1Q13564 534 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 SUSD1Q6UWL2 747 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 FAM92BQ6ZTR7 304 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 ARHGAP22Q7Z5H3 698 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 SLC22A18Q96BI1 424 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 RHBDF1Q96CC6 855 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 SCYL1Q96KG9 808 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 CCDC74BQ96LY2 380 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 PPM1MQ96MI6 270 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 DEPDC7Q96QD5 511 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 MAP3K3Q99759 626 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 EGFL8Q99944 293 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 ATG10Q9H0Y0 220 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 TMEM216Q9P0N5 145 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 SEMA5BQ9P283 1151 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 KLHL3Q9UH77 587 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 DCDC2Q9UHG0 476 aa16.09■□□□□ 0.17
RNF40-207ENST00000565931 TMX2-CTNND1H3BSU7 103 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 UBXN8O00124 270 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 JUPP14923 745 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 KRT4P19013 534 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 LSSP48449 732 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 TARDBPQ13148 414 aaKnown RBP eCLIP16.08■□□□□ 0.16
RNF40-207ENST00000565931 TRA2AQ13595 282 aaKnown RBP eCLIP16.08■□□□□ 0.16
RNF40-207ENST00000565931 TNFAIP8L3Q5GJ75 292 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 SNAP47Q5SQN1 464 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 SULT1C3Q6IMI6 304 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 C16orf46Q6P387 395 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 SPESP1Q6UW49 350 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 CDHR3Q6ZTQ4 885 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 HDXQ7Z353 690 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 PRSS42Q7Z5A4 293 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 C4orf33Q8N1A6 199 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 GALNT15Q8N3T1 639 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 TMEM151AQ8N4L1 468 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 PDPRQ8NCN5 879 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 OR2A1Q8NGT9 310 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 OR56A3Q8NH54 315 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 EXT2Q93063 718 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 PGM2Q96G03 612 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 MRPL57Q9BQC6 102 aaKnown RBP16.08■□□□□ 0.16
RNF40-207ENST00000565931 SGPP1Q9BX95 441 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 PITPNM3Q9BZ71 974 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 C1GALT1Q9NS00 363 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 NUDT4Q9NZJ9 180 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 XPR1Q9UBH6 696 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 ASXL3Q9C0F0 2248 aa16.08■□□□□ 0.16
RNF40-207ENST00000565931 TLCD2A6NGC4 264 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 NCF1BA6NI72 391 aaPredicted RBP16.07■□□□□ 0.16
RNF40-207ENST00000565931 SYCE1LA8MT33 242 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 A8MU76 341 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 NCF1CA8MVU1 366 aaPredicted RBP16.07■□□□□ 0.16
RNF40-207ENST00000565931 SUPT3HB4E1H0 165 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 AGPSO00116 658 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 MAP2K7O14733 419 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 TOX3O15405 576 aaPredicted RBP16.07■□□□□ 0.16
RNF40-207ENST00000565931 TAPBPO15533 448 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 GLRA3O75311 464 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 SUPT3HO75486 399 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 ANKRD34CP0C6C1 535 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 NCF1P14598 390 aaPredicted RBP16.07■□□□□ 0.16
RNF40-207ENST00000565931 CRHR1P34998 444 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 HNMTP50135 292 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 TBPL1P62380 186 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 SLC5A12Q1EHB4 618 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 C18orf21Q32NC0 220 aaPredicted RBP16.07■□□□□ 0.16
RNF40-207ENST00000565931 PHF19Q5T6S3 580 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 CACHD1Q5VU97 1274 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 TRIM73Q86UV7 250 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 FAM20CQ8IXL6 584 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 SRRM1Q8IYB3 904 aaKnown RBP16.07■□□□□ 0.16
RNF40-207ENST00000565931 CARFQ8N187 725 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 TCAIMQ8N3R3 496 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 KLHL6Q8WZ60 621 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 GRAMD1AQ96CP6 724 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 MRPL46Q9H2W6 279 aaKnown RBP16.07■□□□□ 0.16
RNF40-207ENST00000565931 CCDC177Q9NQR7 707 aaPredicted RBP16.07■□□□□ 0.16
RNF40-207ENST00000565931 CD274Q9NZQ7 290 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 PTBP2Q9UKA9 531 aaKnown RBP16.07■□□□□ 0.16
RNF40-207ENST00000565931 PCDHB11Q9Y5F2 797 aa16.07■□□□□ 0.16
RNF40-207ENST00000565931 IGHV5-51A0A0C4DH38 117 aa16.06■□□□□ 0.16
RNF40-207ENST00000565931 FAM149AA5PLN7 773 aa16.06■□□□□ 0.16
RNF40-207ENST00000565931 TARM1B6A8C7 271 aa16.06■□□□□ 0.16
RNF40-207ENST00000565931 COPEO14579 308 aa16.06■□□□□ 0.16
RNF40-207ENST00000565931 HYAL3O43820 417 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms