RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 PPP2R5EQ16537 467 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 DEFB110Q30KQ9 67 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 YOD1Q5VVQ6 348 aaPredicted RBP8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 HIBCHQ6NVY1 386 aaPredicted RBP8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 RIPOR1Q6ZS17 1223 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 ADGRF3Q8IZF5 1079 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 DNAJC22Q8N4W6 341 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 WFDC11Q8NEX6 87 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 RBM41Q96IZ5 413 aaKnown RBP8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 PACSIN1Q9BY11 444 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 CLEC4MQ9H2X3 399 aaPredicted RBP8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 BPIFA1Q9NP55 256 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 IL26Q9NPH9 171 aa8.65□□□□□ -1.02
VPS9D1-205ENST00000565452 AKAP6Q13023 2319 aa8.65□□□□□ -1.03
VPS9D1-205ENST00000565452 DOCK10Q96BY6 2186 aa8.65□□□□□ -1.03
VPS9D1-205ENST00000565452 USP27XA6NNY8 438 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 IFRD1O00458 451 aaPredicted RBP8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 DSCR3O14972 297 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 ZSCAN12O43309 604 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 HCRTR1O43613 425 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 UGT1A9O60656 530 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 CTSBP07858 339 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 UGT1A6P19224 532 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 MSH3P20585 1137 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 UGT1A1P22309 533 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 HOXC12P31275 282 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 CCZ1BP86790 482 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 CCZ1P86791 482 aaPredicted RBP8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 KLC1Q07866 573 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 ZIC1Q15915 447 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 DPYSL2Q16555 572 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 DEFB113Q30KQ7 82 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 FAM214AQ32MH5 1076 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 LRRC38Q5VT99 294 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 ZNF449Q6P9G9 518 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 CNSTQ6PJW8 725 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 MAP7D3Q8IWC1 876 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 SYCE1Q8N0S2 351 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 FAM98AQ8NCA5 519 aaKnown RBP8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 PHC3Q8NDX5 983 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 RND1Q92730 232 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 MIEF2Q96C03 454 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 C8orf44Q96CB5 159 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 TSGA13Q96PP4 275 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 TSPAN10Q9H1Z9 355 aaPredicted RBP8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 MVB12BQ9H7P6 319 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 UGT1A7Q9HAW7 530 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 UGT1A10Q9HAW8 530 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 UGT1A8Q9HAW9 530 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 NEUROD4Q9HD90 331 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 RASSF1Q9NS23 344 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 EURLQ9NYK6 297 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 C3orf18Q9UK00 162 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 ZNF711Q9Y462 761 aa8.64□□□□□ -1.03
VPS9D1-205ENST00000565452 ANKRD12Q6UB98 2062 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 A0A0J9YY10 115 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 FAM90A27PA6NNH2 459 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 KLK8O60259 260 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 HLA-DQB2P05538 268 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 MMP2P08253 660 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 CD46P15529 392 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 EEF1DP29692 281 aaKnown RBP8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 AKT1P31749 480 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 CD151P48509 253 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 NAP1L1P55209 391 aaKnown RBP8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 ZNF33BQ06732 778 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 GALNT2Q10471 571 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 PRKG2Q13237 762 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 ITGA9Q13797 1035 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 KEAP1Q14145 624 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 MESDQ14696 234 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 PDK2Q15119 407 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 GPRC6AQ5T6X5 926 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 CYP4V2Q6ZWL3 525 aaPredicted RBP8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 COX15Q7KZN9 410 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 DET1Q7L5Y6 550 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 NLRP9Q7RTR0 991 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 TRIM73Q86UV7 250 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 VSIG1Q86XK7 387 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 MCATQ8IVS2 390 aaKnown RBP8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 DDHD1Q8NEL9 900 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 OR52E1Q8NGJ3 308 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 STT3BQ8TCJ2 826 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 HSPH1Q92598 858 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 HDAC10Q969S8 669 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 LINC00615Q96LM1 132 aaPredicted RBP8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 RMDN2Q96LZ7 410 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 XKR8Q9H6D3 395 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 CUTCQ9NTM9 273 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 DDX56Q9NY93 547 aaKnown RBP8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 LRFN1Q9P244 771 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 FAM8A1Q9UBU6 413 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 CTSFQ9UBX1 484 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 ZNF282Q9UDV7 671 aaPredicted RBP8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 RNF6Q9Y252 685 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 REXO2Q9Y3B8 237 aaKnown RBP8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 ALG6Q9Y672 507 aa8.63□□□□□ -1.03
VPS9D1-205ENST00000565452 ASPDHA6ND91 283 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 RCCD1A6NED2 376 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms