RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 NANPQ8TBE9 248 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 NSUN6Q8TEA1 469 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 GLYATL2Q8WU03 294 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 TSPEARQ8WU66 669 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 FAR1Q8WVX9 515 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 C1orf54Q8WWF1 131 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 RAB24Q969Q5 203 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 TMBIM1Q969X1 311 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 SLCO4A1Q96BD0 722 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 R3HDM4Q96D70 268 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 SCMH1Q96GD3 660 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 NARS2Q96I59 477 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 SUCLG2Q96I99 432 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 MBOAT7Q96N66 472 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 KCTD15Q96SI1 283 aaPredicted RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 CYP2S1Q96SQ9 504 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 KCNJ15Q99712 375 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 BARD1Q99728 777 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 DBNDD2Q9BQY9 259 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF559Q9BR84 538 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 NAT9Q9BTE0 207 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 TMED9Q9BVK6 235 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ITPAQ9BY32 194 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 CPEB1Q9BZB8 566 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 THAP2Q9H0W7 228 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 TMPRSS5Q9H3S3 457 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ALG2Q9H553 416 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 DUSP21Q9H596 190 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ASB7Q9H672 318 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ESRP2Q9H6T0 727 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 DDX31Q9H8H2 851 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 SPACA1Q9HBV2 294 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 SPON1Q9HCB6 807 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 XPNPEP1Q9NQW7 623 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 TMEM45AQ9NWC5 275 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 MPP6Q9NZW5 540 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 NUFIP1Q9UHK0 495 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 C3orf18Q9UK00 162 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 FBXL21Q9UKT6 434 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 INTS6Q9UL03 887 aaKnown RBP6.16□□□□□ -1.42
PTPN9-204ENST00000564970 DLGAP4Q9Y2H0 992 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 PADI2Q9Y2J8 665 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 KCNIP3Q9Y2W7 256 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 PCDHA1Q9Y5I3 950 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 KLK4Q9Y5K2 254 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 PTPRJQ12913 1337 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 CNTNAP5Q8WYK1 1306 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 ZNF541Q9H0D2 1346 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 FLT4P35916 1363 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 TOGARAM1Q9Y4F4 1720 aa6.16□□□□□ -1.42
PTPN9-204ENST00000564970 PCNTO95613 3336 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 SOWAHBA6NEL2 793 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 ASB14A6NK59 587 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 MARCH11A6NNE9 402 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 NUDT19A8MXV4 375 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 KBTBD13C9JR72 458 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 SLC1A7O00341 560 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 EI24O14681 340 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 TCAPO15273 167 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 SLC16A6O15403 523 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 PSMD3O43242 534 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 TGM5O43548 720 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 HCRTR2O43614 444 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 LIASO43766 372 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 VEGFDO43915 354 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 AIREO43918 545 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 EIF3GO75821 320 aaKnown RBP eCLIP6.15□□□□□ -1.42
PTPN9-204ENST00000564970 CBR3O75828 277 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 CABYRO75952 493 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 SRP72O76094 671 aaKnown RBP6.15□□□□□ -1.42
PTPN9-204ENST00000564970 INMTO95050 263 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 PRSS23O95084 383 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 S1PR4O95977 384 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 GLUD1P00367 558 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 FTLP02792 175 aaPredicted RBP6.15□□□□□ -1.42
PTPN9-204ENST00000564970 ACAA1P09110 424 aaPredicted RBP6.15□□□□□ -1.42
PTPN9-204ENST00000564970 OR4E1P0C645 316 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 USP17L8P0C7I0 530 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 FGF3P11487 239 aaPredicted RBP6.15□□□□□ -1.42
PTPN9-204ENST00000564970 PEPDP12955 493 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 CD36P16671 472 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 NELFEP18615 380 aaKnown RBP6.15□□□□□ -1.42
PTPN9-204ENST00000564970 LHCGRP22888 699 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 DNASE1P24855 282 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 HSD3B2P26439 372 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 SDHAP31040 664 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 BMI1P35226 326 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 NOS2P35228 1153 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 TECP42680 631 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 CTSKP43235 329 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 RFX2P48378 723 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 MAN2A2P49641 1150 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 CLDN20P56880 219 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 BCAR1P56945 870 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 ABATP80404 500 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 TFCP2Q12800 502 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 PRKAA1Q13131 559 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 SLAMF1Q13291 335 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 BIKQ13323 160 aa6.15□□□□□ -1.42
PTPN9-204ENST00000564970 EXOSC2Q13868 293 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms