RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 C11orf24Q96F05 449 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-209ENST00000564068 RNF208Q9H0X6 261 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 ISPDA4D126 451 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 A6NL46 340 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 ESR1P03372 595 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 CATP04040 527 aaKnown RBP12.33□□□□□ -0.44
COMMD4-209ENST00000564068 ANXA4P09525 319 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-209ENST00000564068 GABRB3P28472 473 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 STC1P52823 247 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 CRYBB1P53674 252 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-209ENST00000564068 YBEYP58557 167 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-209ENST00000564068 SP3Q02447 781 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 TUBA3EQ6PEY2 450 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 ANKS3Q6ZW76 656 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 GOLM1Q8NBJ4 401 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 PTERQ96BW5 349 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 MYH9P35579 1960 aaKnown RBP12.33□□□□□ -0.44
COMMD4-209ENST00000564068 LOC730098B7Z3J9 87 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 ZNF195O14628 629 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 AOC2O75106 756 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 FYNP06241 537 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 MLLT6P55198 1093 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-209ENST00000564068 ZNF45Q02386 682 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 ST3GAL4Q11206 333 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 IQCCQ4KMZ1 466 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 TPGS1Q6ZTW0 290 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 C14orf80Q86SX3 495 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 SERPINA9Q86WD7 417 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 RAVER1Q8IY67 606 aaKnown RBP12.33□□□□□ -0.44
COMMD4-209ENST00000564068 KCTD13Q8WZ19 329 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 TBC1D17Q9HA65 648 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 ZFYVE1Q9HBF4 777 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 TVP23BQ9NYZ1 205 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 ENPP5Q9UJA9 477 aa12.33□□□□□ -0.44
COMMD4-209ENST00000564068 PRDX3P30048 256 aaKnown RBP12.32□□□□□ -0.44
COMMD4-209ENST00000564068 CD52P31358 61 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 RPL9P32969 192 aaKnown RBP12.32□□□□□ -0.44
COMMD4-209ENST00000564068 GTDC1Q4AE62 458 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 POF1BQ8WVV4 589 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 DPF3Q92784 378 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 HSH2DQ96JZ2 352 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ALPK1Q96QP1 1244 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ACAT2Q9BWD1 397 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 SIAEQ9HAT2 523 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 CRTAC1Q9NQ79 661 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 CTPS2Q9NRF8 586 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 HS3ST4Q9Y661 456 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 EEDO75530 441 aaKnown RBP12.32□□□□□ -0.44
COMMD4-209ENST00000564068 CCNDBP1O95273 360 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 DNTTP04053 509 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 STSP08842 583 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 PRSS56P0CW18 603 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 PRPS2P11908 318 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 NOS3P29474 1203 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 FAM189BP81408 668 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 EMX1Q04741 257 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-209ENST00000564068 CDK5R2Q13319 367 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 MTA1Q13330 715 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ACOX1Q15067 660 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 BICRALQ6AI39 1079 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 GOLGA7Q7Z5G4 137 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 IZUMO1Q8IYV9 350 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 DPP10Q8N608 796 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 C8orf48Q96LL4 319 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ZNF599Q96NL3 588 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ANKRA2Q9H9E1 313 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 CPNE5Q9HCH3 593 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 CCDC177Q9NQR7 707 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-209ENST00000564068 POLR3BQ9NW08 1133 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-209ENST00000564068 CLCA2Q9UQC9 943 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 PCDHGA11Q9Y5H2 935 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 CORINQ9Y5Q5 1042 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ITGB4P16144 1822 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 INSIG1O15503 277 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 GADD45GO95257 159 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 PPIBP23284 216 aaKnown RBP12.32□□□□□ -0.44
COMMD4-209ENST00000564068 HTR1BP28222 390 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 SDC2P34741 201 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 RCVRNP35243 200 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 DCTP40126 519 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 PTGER3P43115 390 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 HTR6P50406 440 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ACLYP53396 1101 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 IL10RBQ08334 325 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 WSCD2Q2TBF2 565 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-209ENST00000564068 GPRIN1Q7Z2K8 1008 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ZBTB2Q8N680 514 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ZNF675Q8TD23 568 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ZNF717Q9BY31 904 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-209ENST00000564068 DERL2Q9GZP9 239 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 CORO2BQ9UQ03 480 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 PCDHB1Q9Y5F3 818 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 TRPV2Q9Y5S1 764 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 SPIN1Q9Y657 262 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-209ENST00000564068 PRAMEF33A0A0G2JMD5 474 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 SLC30A4O14863 429 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 ORC5O43913 435 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 OR1I1O60431 355 aa12.32□□□□□ -0.44
COMMD4-209ENST00000564068 PRAMEF10O60809 474 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms