RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 MFSD2AQ8NA29 543 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 FBXO15Q8NCQ5 510 aaPredicted RBP20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 OR2T12Q8NG77 320 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 TESCQ96BS2 214 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 METTL2AQ96IZ6 378 aaKnown RBP20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 THUMPD3Q9BV44 507 aaKnown RBP20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 KCNH6Q9H252 994 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 RPF2Q9H7B2 306 aaKnown RBP20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 VAPAQ9P0L0 249 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 STOX2Q9P2F5 926 aaPredicted RBP20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 MAN2B2Q9Y2E5 1009 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 ALPK3Q96L96 1907 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 AREL1O15033 823 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 GSTA4O15217 222 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 SPINT1O43278 529 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 TPST1O60507 370 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 LDLRP01130 860 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 CKMT2P17540 419 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PAX7P23759 505 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PREPP48147 710 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 HNRNPFP52597 415 aaKnown RBP20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 DUSP6Q16828 381 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 GAB4Q2WGN9 574 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 LIN52Q52LA3 116 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 RUNDC3AQ59EK9 446 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 DSG4Q86SJ6 1040 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PHC3Q8NDX5 983 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 FAM110BQ8TC76 370 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 POP5Q969H6 163 aaKnown RBP20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 ZNF514Q96K75 400 aaPredicted RBP20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 FCRL1Q96LA6 429 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 ZNF583Q96ND8 569 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 MRPS26Q9BYN8 205 aaKnown RBP20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 YIPF3Q9GZM5 350 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PIF1Q9H611 641 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 GORASP2Q9H8Y8 452 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 GDE1Q9NZC3 331 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 NDUFA13Q9P0J0 144 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 DLGAP4Q9Y2H0 992 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 NEUROG3Q9Y4Z2 214 aa20.74■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 A0A096LPI6 279 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 HEPACAM2A8MVW5 462 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 SOCS2O14508 198 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PRMT3O60678 531 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PRAMEF4O60810 478 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 HLA-EP13747 358 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 HSD3B1P14060 373 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 AMD1P17707 334 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 HSD3B2P26439 372 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 NAE1Q13564 534 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 GTF2H3Q13889 308 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 TMEM52BQ4KMG9 183 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PRAMEF9Q5VWM5 478 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 ATG9BQ674R7 924 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 GRHL2Q6ISB3 625 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 SPRED1Q7Z699 444 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 TMEM132CQ8N3T6 1108 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 DTWD1Q8N5C7 304 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 CLHC1Q8NHS4 586 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 NUDT8Q8WV74 236 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 ZFYVE19Q96K21 471 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 AK5Q9Y6K8 562 aa20.73■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 H3BM21 787 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 LZTS3O60299 673 aaPredicted RBP20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 RECQL5O94762 991 aaPredicted RBP20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 ADRB3P13945 408 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 SDC1P18827 310 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 GPR1P46091 355 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PNLIPRP1P54315 467 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PLIN5Q00G26 463 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PLOD1Q02809 727 aaPredicted RBP20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 DPTQ07507 201 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 DPY19L1Q2PZI1 675 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 FAM98BQ52LJ0 330 aaKnown RBP20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 LRIF1Q5T3J3 769 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 CARM1Q86X55 608 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 CBR4Q8N4T8 237 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 VN1R2Q8NFZ6 395 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 OR56A3Q8NH54 315 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 FGF13Q92913 245 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 APIPQ96GX9 242 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 TRPV4Q9HBA0 871 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 GPRC5BQ9NZH0 403 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PADI4Q9UM07 663 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 USP22Q9UPT9 525 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 RNF103-CHMP3A0A140T963 221 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 C1QTNF3-AMACRE9PGA6 284 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 H0YIV9 168 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 RASAL1O95294 804 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PRPS1L1P21108 318 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PBLDP30039 288 aaPredicted RBP20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 BDKRB1P46663 353 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 NRIP1P48552 1158 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 MYBPC1Q00872 1141 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 ZNF234Q14588 700 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 NOXRED1Q6NXP6 359 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 MED8Q96G25 268 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 APOLD1Q96LR9 279 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 FAM129BQ96TA1 746 aa20.72■□□□□ 0.91
VPS9D1-AS1-202ENST00000562866 PKP4Q99569 1192 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms