RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 KRT20P35900 424 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 CDKN2CP42773 168 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 GZMMP51124 257 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 ABHD18Q0P651 414 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 SMU1Q2TAY7 513 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 COLEC12Q5KU26 742 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 KDM4DQ6B0I6 523 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 FAM151BQ6UXP7 276 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 SNX20Q7Z614 316 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 GALNT10Q86SR1 603 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 SAPCD2Q86UD0 394 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 EFHD2Q96C19 240 aaPredicted RBP13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 C6orf62Q9GZU0 229 aaPredicted RBP13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 TM9SF3Q9HD45 589 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 SLCO3A1Q9UIG8 710 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 SAMHD1Q9Y3Z3 626 aaKnown RBP13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 CENPFP49454 3210 aa13.63□□□□□ -0.23
VPS9D1-202ENST00000561976 WNT9AO14904 365 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 ACSL4O60488 711 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 SLC25A14O95258 325 aaPredicted RBP13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 FKBP9O95302 570 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 ZNF7P17097 686 aaPredicted RBP13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 CTPS1P17812 591 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 DNAJA1P31689 397 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 EIF2DP41214 584 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 DEPDC1Q5TB30 811 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 SPRYD7Q5W111 196 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 ZCCHC8Q6NZY4 707 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 LINGO4Q6UY18 593 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 PRSS48Q7RTY5 328 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 TRIM46Q7Z4K8 759 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 CLDN19Q8N6F1 224 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 PAF1Q8N7H5 531 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 DNAJB8Q8NHS0 232 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 POP5Q969H6 163 aaKnown RBP13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 PYCR2Q96C36 320 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 PTPN18Q99952 460 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 BOCQ9BWV1 1114 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 GABARAPL1Q9H0R8 117 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 ZBTB20Q9HC78 741 aaPredicted RBP13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 SERHLQ9NQF3 203 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 OSGIN1Q9UJX0 560 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 ERVW-1Q9UQF0 538 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 NOD1Q9Y239 953 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 DLGAP4Q9Y2H0 992 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 PCDHB9Q9Y5E1 797 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 EVPLLA8MZ36 301 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 RFXANKO14593 260 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 UPK1BO75841 260 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 WDR47O94967 919 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 FABP3P05413 133 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 DGKAP23743 735 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 MAGEA2P43356 314 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 CDH4P55283 916 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 IRF5Q13568 498 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 ARHGEF7Q14155 803 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 LRIF1Q5T3J3 769 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 AKAP14Q86UN6 197 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 SERPINA9Q86WD7 417 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 LKAAEAR1Q8TD35 194 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 SGIP1Q9BQI5 828 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 ABCG8Q9H221 673 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 CPNE5Q9HCH3 593 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 IL1RAPQ9NPH3 570 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 LATS2Q9NRM7 1088 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 IL37Q9NZH6 218 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 ERVK-11Q9UQG0 969 aa13.62□□□□□ -0.23
VPS9D1-202ENST00000561976 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 H7C0S8 307 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 SNPHO15079 494 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 AIREO43918 545 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 PGLSO95336 258 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 EBLN1P0CF75 366 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 MAGP20916 626 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 FPR1P21462 350 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 ZNF177Q13360 481 aaPredicted RBP13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 DSC3Q14574 896 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 ZNF404Q494X3 552 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 KIAA1614Q5VZ46 1190 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 GLB1LQ6UWU2 654 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 MBOAT1Q6ZNC8 495 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 TSPYL5Q86VY4 417 aaPredicted RBP13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 LYSMD2Q8IV50 215 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 PLPP6Q8IY26 295 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 CEP295NLQ96MC4 621 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 SP140LQ9H930 580 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 AASDHPPTQ9NRN7 309 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 GPRC5BQ9NZH0 403 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 TRPS1Q9UHF7 1281 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 OR2A25A4D2G3 310 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 KRT6AP02538 564 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 KRT6BP04259 564 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 DBTP11182 482 aaKnown RBP13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 TGFBR2P37173 567 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 MAGEA11P43364 429 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 KRT6CP48668 564 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 SLC11A2P49281 568 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 CLDN8P56748 225 aa13.61□□□□□ -0.23
VPS9D1-202ENST00000561976 SLC14A1Q13336 389 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms