RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 FAM60AQ9NP50 221 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 TXNDC16Q9P2K2 825 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 SSUH2Q9Y2M2 353 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 VWA7Q9Y334 891 aa19.21■□□□□ 0.67
TSPAN3-210ENST00000561277 FAM95CA0A1B0GW59 222 aa19.2■□□□□ 0.66
TSPAN3-210ENST00000561277 EIF3FO00303 357 aaPredicted RBP19.2■□□□□ 0.66
TSPAN3-210ENST00000561277 ZBTB14O43829 449 aa19.2■□□□□ 0.66
TSPAN3-210ENST00000561277 SCRG1O75711 98 aa19.2■□□□□ 0.66
TSPAN3-210ENST00000561277 FDXRP22570 491 aa19.2■□□□□ 0.66
TSPAN3-210ENST00000561277 LRRC8EQ6NSJ5 796 aa19.2■□□□□ 0.66
TSPAN3-210ENST00000561277 TCTN2Q96GX1 697 aa19.2■□□□□ 0.66
TSPAN3-210ENST00000561277 MIPEPQ99797 713 aa19.2■□□□□ 0.66
TSPAN3-210ENST00000561277 PRORYQ9H606 182 aa19.2■□□□□ 0.66
TSPAN3-210ENST00000561277 LRRC4CQ9HCJ2 640 aa19.2■□□□□ 0.66
TSPAN3-210ENST00000561277 SNRNP200O75643 2136 aaKnown RBP19.2■□□□□ 0.66
TSPAN3-210ENST00000561277 EFSO43281 561 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 SLC16A8O95907 504 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 NTRK1P04629 796 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 GSTA2P09210 222 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 OAS2P29728 719 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 VAC14Q08AM6 782 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 CYP2A13Q16696 494 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 GLE1Q53GS7 698 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 PRAMEF17Q5VTA0 474 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 SUSD1Q6UWL2 747 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 C6orf15Q6UXA7 325 aaPredicted RBP19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 BPHLQ86WA6 291 aaPredicted RBP19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 CTAGE3PQ8IX95 158 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 ESX1Q8N693 406 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 PPFIBP2Q8ND30 876 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 OR1L3Q8NH93 324 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 HMGCLL1Q8TB92 370 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 ACAT2Q9BWD1 397 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 RHOJQ9H4E5 214 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 RALYQ9UKM9 306 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 ADAMTS6Q9UKP5 1117 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 MGAQ8IWI9 3026 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 FAM159BA6NKW6 160 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 GFYI3L273 518 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 ERGP11308 486 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 LIFP15018 202 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 IL2P60568 153 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 ZNF460Q14592 562 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 SYTL1Q8IYJ3 562 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 OR8K5Q8NH50 307 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 VPS39Q96JC1 886 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 SYTL2Q9HCH5 934 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 ABCF3Q9NUQ8 709 aa19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 MTRF1LQ9UGC7 380 aaKnown RBP19.19■□□□□ 0.66
TSPAN3-210ENST00000561277 LOC101059948A0A1B0GTJ6 334 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 A0A1W2PPV9 198 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 K7ENP7 123 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 HCRTR1O43613 425 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 PRICKLE3O43900 615 aaPredicted RBP19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 TSPAN12O95859 305 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 WT1P19544 449 aaPredicted RBP19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 CYP2A7P20853 494 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 PNLIPRP1P54315 467 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 TAS2R39P59534 338 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 KBTBD12Q3ZCT8 623 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 KIAA1614Q5VZ46 1190 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 INO80CQ6PI98 192 aaPredicted RBP19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 GPR155Q7Z3F1 870 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 FBXO15Q8NCQ5 510 aaPredicted RBP19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 FBF1Q8TES7 1133 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 ZNF480Q8WV37 535 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 DLG3Q92796 817 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 KIAA1143Q96AT1 154 aaPredicted RBP19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 FCRL4Q96PJ5 515 aa19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 GPN2Q9H9Y4 310 aaPredicted RBP19.18■□□□□ 0.66
TSPAN3-210ENST00000561277 CPNE3O75131 537 aaKnown RBP19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 C8GP07360 202 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 MSL3P1P0C860 447 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 STX2P32856 288 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 RPA3P35244 121 aaPredicted RBP19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 STAT5AP42229 794 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 ITGA1P56199 1179 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 ABHD18Q0P651 414 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 MAP7Q14244 749 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 ARHGAP19Q14CB8 494 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 PPM1NQ8N819 430 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 OR2L3Q8NG85 312 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 SMPDL3AQ92484 453 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 FMO2Q99518 471 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 CPNE1Q99829 537 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 MCMBPQ9BTE3 642 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 INTS7Q9NVH2 962 aaKnown RBP19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 IRAK4Q9NWZ3 460 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 SERTAD3Q9UJW9 196 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 PCDHGA4Q9Y5G9 962 aa19.17■□□□□ 0.66
TSPAN3-210ENST00000561277 ZNF839A8K0R7 811 aa19.16■□□□□ 0.66
TSPAN3-210ENST00000561277 C1QAP02745 245 aa19.16■□□□□ 0.66
TSPAN3-210ENST00000561277 ZNF37AP17032 561 aaPredicted RBP19.16■□□□□ 0.66
TSPAN3-210ENST00000561277 HSD17B2P37059 387 aa19.16■□□□□ 0.66
TSPAN3-210ENST00000561277 GP5P40197 560 aa19.16■□□□□ 0.66
TSPAN3-210ENST00000561277 SLC12A2P55011 1212 aa19.16■□□□□ 0.66
TSPAN3-210ENST00000561277 YBX1P67809 324 aaKnown RBP19.16■□□□□ 0.66
TSPAN3-210ENST00000561277 SP140Q13342 867 aa19.16■□□□□ 0.66
TSPAN3-210ENST00000561277 COL9A2Q14055 689 aaPredicted RBP19.16■□□□□ 0.66
TSPAN3-210ENST00000561277 EFTUD2Q15029 972 aaKnown RBP eCLIP19.16■□□□□ 0.662e-8■■■■■ 32.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms