RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, human

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME1-208	ENST00000561059	SKA2	Q8WVK7	121 aa	Predicted RBP	12.85	□□□□□ -0.35
PSME1-208	ENST00000561059	FAM136A	Q96C01	138 aa		12.85	□□□□□ -0.35
PSME1-208	ENST00000561059	HES6	Q96HZ4	224 aa		12.85	□□□□□ -0.35
PSME1-208	ENST00000561059	IP6K3	Q96PC2	410 aa		12.85	□□□□□ -0.35
PSME1-208	ENST00000561059	MIPEP	Q99797	713 aa		12.85	□□□□□ -0.35
PSME1-208	ENST00000561059	CHRNA10	Q9GZZ6	450 aa		12.85	□□□□□ -0.35
PSME1-208	ENST00000561059	CHRAC1	Q9NRG0	131 aa		12.85	□□□□□ -0.35
PSME1-208	ENST00000561059	SLC39A10	Q9ULF5	831 aa		12.85	□□□□□ -0.35
PSME1-208	ENST00000561059	SNRNP200	O75643	2136 aa	Known RBP	12.85	□□□□□ -0.35
PSME1-208	ENST00000561059		A0A1B0GX78	115 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	ANKUB1	A6NFN9	424 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	AGPS	O00116	658 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	CTSV	O60911	334 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	GPC4	O75487	556 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	ZNF189	O75820	626 aa	Predicted RBP	12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	SUN1	O94901	812 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	ADRA1D	P25100	572 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	AOAH	P28039	575 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	FDFT1	P37268	417 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	GCGR	P47871	477 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	VSX2	P58304	361 aa	Predicted RBP	12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	PLOD1	Q02809	727 aa	Predicted RBP	12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	ACVR1	Q04771	509 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	NKG7	Q16617	165 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	PTRHD1	Q6GMV3	140 aa	Known RBP	12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	FRMPD2B	Q6IN97	320 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	CNST	Q6PJW8	725 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	CES3	Q6UWW8	571 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	OVCH1	Q7RTY7	1134 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	HPS6	Q86YV9	775 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	DCUN1D3	Q8IWE4	304 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	ZADH2	Q8N4Q0	377 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	SPC24	Q8NBT2	197 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	ASZ1	Q8WWH4	475 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	CNDP1	Q96KN2	507 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	TTC1	Q99614	292 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	SPSB2	Q99619	263 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	ATP13A2	Q9NQ11	1180 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	CUTC	Q9NTM9	273 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	CATSPERZ	Q9NTU4	200 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	CUEDC1	Q9NWM3	386 aa	Predicted RBP	12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	TTC7A	Q9ULT0	858 aa	Predicted RBP	12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	PCDHGA10	Q9Y5H3	936 aa		12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	COPG1	Q9Y678	874 aa	Known RBP	12.84	□□□□□ -0.35
PSME1-208	ENST00000561059	GOLGA8K	D6RF30	607 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	GOLGA8T	H3BQL2	631 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	SOCS6	O14544	535 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	RASGRF2	O14827	1237 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	FFAR3	O14843	346 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	CD3EAP	O15446	510 aa	Known RBP	12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	GPR42	O15529	346 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	KDM1A	O60341	852 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	LDLR	P01130	860 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	APOA4	P06727	396 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	F7	P08709	466 aa	Predicted RBP	12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	NMBR	P28336	390 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	RPL22	P35268	128 aa	Known RBP	12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	CRB2	Q5IJ48	1285 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	SEL1L2	Q5TEA6	688 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	KIRREL2	Q6UWL6	708 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	SLC13A5	Q86YT5	568 aa	Predicted RBP	12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	OTUD6B	Q8N6M0	293 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	AMER2	Q8N7J2	671 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	PPHLN1	Q8NEY8	458 aa	Known RBP	12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	OR2L8	Q8NGY9	312 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	DLG3	Q92796	817 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	SELENOS	Q9BQE4	189 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	CARD6	Q9BX69	1037 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	NOVA2	Q9UNW9	492 aa	Known RBP	12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	HS3ST3B1	Q9Y662	390 aa		12.83	□□□□□ -0.36
PSME1-208	ENST00000561059	CSMD1	Q96PZ7	3565 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	LOC105369274	A0A096LPK9	316 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	LOC102723532	A0A0G2JNH3	316 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059		A0A0J9YVX5	310 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	ERI2	A8K979	691 aa	Known RBP	12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	PRMT5	O14744	637 aa	Predicted RBP	12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	DSCR3	O14972	297 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	SLCO2B1	O94956	709 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	S1PR4	O95977	384 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	IGHE	P01854	428 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	RPN2	P04844	631 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	EIF2S1	P05198	315 aa	Known RBP	12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	MMP11	P24347	488 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	STIP1	P31948	543 aa	Known RBP	12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	ARSF	P54793	590 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	EIF3B	P55884	814 aa	Known RBP	12.82	□□□□□ -0.36
PSME1-208	ENST00000561059		Q0VFX4	171 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	AIMP2	Q13155	320 aa	Known RBP	12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	ELOA	Q14241	798 aa	Known RBP	12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	FASTK	Q14296	549 aa	Known RBP	12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	TMED2	Q15363	201 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	RBBP7	Q16576	425 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	WASHC2D	Q5SRD0	308 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	PRAMEF13	Q5VWM6	474 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	IGFL3	Q6UXB1	125 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	UNC5D	Q6UXZ4	953 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	LINC00696	Q6ZRV3	163 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059		Q6ZS92	163 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	MAMDC2	Q7Z304	686 aa	Predicted RBP	12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	OR4N4	Q8N0Y3	316 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms