RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 GPATCH1Q9BRR8 931 aaKnown RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 TIMM29Q9BSF4 260 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 MRPL40Q9NQ50 206 aaKnown RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 CROTQ9UKG9 612 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 ACSL5Q9ULC5 683 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 EIF3LQ9Y262 564 aaKnown RBP12.53□□□□□ -0.4
SNX1-211ENST00000560829 L3MBTL1Q9Y468 752 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 KCNE2Q9Y6J6 123 aa12.53□□□□□ -0.4
SNX1-211ENST00000560829 PRR19A6NJB7 356 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 C10orf142B7Z368 130 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 E7ENX8 843 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 E7EQ34 232 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 CFLARO15519 480 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 FKBP6O75344 327 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 EEDO75530 441 aaKnown RBP12.52□□□□□ -0.41
SNX1-211ENST00000560829 KRT36O76013 467 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 CEACAM5P06731 702 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 ACADMP11310 421 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 SLC2A4P14672 509 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 GNAZP19086 355 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 ME2P23368 584 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 IL12AP29459 219 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 RGS19P49795 217 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 POLR2JP52435 117 aaKnown RBP12.52□□□□□ -0.41
SNX1-211ENST00000560829 TBPL1P62380 186 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 PPP2CBP62714 309 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 RPL38P63173 70 aaKnown RBP12.52□□□□□ -0.41
SNX1-211ENST00000560829 PPP2CAP67775 309 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 TAP2Q03519 686 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 FOXM1Q08050 763 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 PRKG2Q13237 762 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 DOC2AQ14183 400 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 SLC44A4Q53GD3 710 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 AAGABQ6PD74 315 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 TRIM69Q86WT6 500 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 DCUN1D3Q8IWE4 304 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 MINDY1Q8N5J2 469 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 SPDYE1Q8NFV5 336 aaPredicted RBP12.52□□□□□ -0.41
SNX1-211ENST00000560829 WDR20Q8TBZ3 569 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 WDR34Q96EX3 536 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 MED8Q96G25 268 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 SCARF2Q96GP6 870 aaPredicted RBP12.52□□□□□ -0.41
SNX1-211ENST00000560829 APOOQ9BUR5 198 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 SPAG4Q9NPE6 437 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 TM7SF3Q9NS93 570 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 TMEM181Q9P2C4 612 aa12.52□□□□□ -0.41
SNX1-211ENST00000560829 STX18Q9P2W9 335 aaKnown RBP12.52□□□□□ -0.41
SNX1-211ENST00000560829 POLR3HQ9Y535 204 aaPredicted RBP12.52□□□□□ -0.41
SNX1-211ENST00000560829 ASPDHA6ND91 283 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 PRR23AA6NEV1 266 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 FXYD1O00168 92 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 IFRD1O00458 451 aaPredicted RBP12.51□□□□□ -0.41
SNX1-211ENST00000560829 TRIM38O00635 465 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 CLGNO14967 610 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 FUCA1P04066 466 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 RPN2P04844 631 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 ERGP11308 486 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 KELP23276 732 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 PNLIPRP1P54315 467 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 CSTF3Q12996 717 aaKnown RBP12.51□□□□□ -0.41
SNX1-211ENST00000560829 CCNIQ14094 377 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 RCN1Q15293 331 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 SGO1Q5FBB7 561 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 XKR6Q5GH73 641 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 CAPRIN2Q6IMN6 1127 aaKnown RBP12.51□□□□□ -0.41
SNX1-211ENST00000560829 PRMT9Q6P2P2 845 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 SLCO4C1Q6ZQN7 724 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 SYTL1Q8IYJ3 562 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 EFCAB3Q8N7B9 438 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 PPFIBP2Q8ND30 876 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 TFGQ92734 400 aaPredicted RBP12.51□□□□□ -0.41
SNX1-211ENST00000560829 CCDC124Q96CT7 223 aaKnown RBP12.51□□□□□ -0.41
SNX1-211ENST00000560829 EHD1Q9H4M9 534 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 ASF1AQ9Y294 204 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 TMED5Q9Y3A6 229 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 CCDC154A6NI56 674 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 H0Y3Z8 333 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 CACNB4O00305 520 aaPredicted RBP12.51□□□□□ -0.41
SNX1-211ENST00000560829 SEC22BO75396 215 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 HSD3B1P14060 373 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 NPPBP16860 134 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 GABRG2P18507 467 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 HSD3B2P26439 372 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 GCKP35557 465 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 KIAA1024LP59773 190 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 TDGQ13569 410 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 ARHGAP19Q14CB8 494 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 TLR1Q15399 786 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 CACHD1Q5VU97 1274 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 KIAA1324Q6UXG2 1013 aaKnown RBP12.51□□□□□ -0.41
SNX1-211ENST00000560829 GLB1L3Q8NCI6 653 aaPredicted RBP12.51□□□□□ -0.41
SNX1-211ENST00000560829 OR2T34Q8NGX1 318 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 OR5K2Q8NHB8 316 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 SETD7Q8WTS6 366 aaKnown RBP12.51□□□□□ -0.41
SNX1-211ENST00000560829 CMTM7Q96FZ5 175 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 METTL2AQ96IZ6 378 aaKnown RBP12.51□□□□□ -0.41
SNX1-211ENST00000560829 FCRL1Q96LA6 429 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 BTBD1Q9H0C5 482 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 GID8Q9NWU2 228 aa12.51□□□□□ -0.41
SNX1-211ENST00000560829 ABCD2Q9UBJ2 740 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms