RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CHID1Q9BWS9 393 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 TCF7L2Q9NQB0 619 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 DDX4Q9NQI0 724 aaKnown RBP6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 POLE4Q9NR33 117 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 TNFRSF10DQ9UBN6 386 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 VPS4AQ9UN37 437 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 PLLPQ9Y342 182 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 PCDHAC2Q9Y5I4 1007 aa6.59□□□□□ -1.36
TSPAN3-209ENST00000560715 SCN9AQ15858 1988 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 ATRNL1Q5VV63 1379 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 ISPDA4D126 451 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 SLC16A3O15427 465 aaKnown RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 NDUFA2O43678 99 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 ACSL4O60488 711 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 VPS4BO75351 444 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 AKAP3O75969 853 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 LY86O95711 162 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 JUNBP17275 347 aaPredicted RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 SMPD1P17405 629 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 GLRA2P23416 452 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 RBL1P28749 1068 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 SSTR1P30872 391 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 ARSFP54793 590 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 NAPAP54920 295 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 SRP54P61011 504 aaKnown RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 MS4A2Q01362 244 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 PCLAFQ15004 111 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 NEDD8Q15843 81 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 CLVS2Q5SYC1 327 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 PDPK2PQ6A1A2 396 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 FAM171BQ6P995 826 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 MFSD7Q6UXD7 560 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 CDHR3Q6ZTQ4 885 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 NUDCD3Q8IVD9 361 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 LHFPL5Q8TAF8 219 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 PIWIL2Q8TC59 973 aaKnown RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 PNPT1Q8TCS8 783 aaKnown RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 CCDC17Q96LX7 622 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 GLT1D1Q96MS3 346 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 CSF3RQ99062 836 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 FAM118BQ9BPY3 351 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 C1QTNF7Q9BXJ2 289 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 SEMA6AQ9H2E6 1030 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 NGBQ9NPG2 151 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 FARSBQ9NSD9 589 aaKnown RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 NPAP1Q9NZP6 1156 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 PACSIN3Q9UKS6 424 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 SHOC2Q9UQ13 582 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 CCDC195A0A1B0GUA6 201 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 H0Y858 1186 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 NFIBO00712 420 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 GMFGO60234 142 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 ZMPSTE24O75844 475 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 DDAH2O95865 285 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 ONECUT2O95948 504 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 PNPP00491 289 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 NPPAP01160 153 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 GH2P01242 217 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 RB1P06400 928 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 DBTP11182 482 aaKnown RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 PDGFRAP16234 1089 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 PIK3R1P27986 724 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 SHMT1P34896 483 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 BST2Q10589 180 aaKnown RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 SNTA1Q13424 505 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 NAB1Q13506 487 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 GALNT3Q14435 633 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 RNASEH2BQ5TBB1 312 aaKnown RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 MRPL14Q6P1L8 145 aaKnown RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 ARCQ7LC44 396 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 ADGRG5Q8IZF4 528 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 TCAIMQ8N3R3 496 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 CMASQ8NFW8 434 aaPredicted RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 OR6F1Q8NGZ6 308 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 WDR48Q8TAF3 677 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 ZFP90Q8TF47 636 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 SLC20A1Q8WUM9 679 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 CORO2AQ92828 525 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 TOE1Q96GM8 510 aaKnown RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 CEP170P1Q96L14 293 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 C17orf62Q9BQA9 187 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 BCL7BQ9BQE9 202 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 WNT5BQ9H1J7 359 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 FAM96AQ9H5X1 160 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 TLR9Q9NR96 1032 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 COPG2Q9UBF2 871 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 ASH2LQ9UBL3 628 aa6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 WBP11Q9Y2W2 641 aaKnown RBP6.58□□□□□ -1.36
TSPAN3-209ENST00000560715 PCP4L1A6NKN8 68 aa6.57□□□□□ -1.36
TSPAN3-209ENST00000560715 C12orf71A8MTZ7 269 aa6.57□□□□□ -1.36
TSPAN3-209ENST00000560715 ACOT8O14734 319 aa6.57□□□□□ -1.36
TSPAN3-209ENST00000560715 FGF10O15520 208 aaPredicted RBP6.57□□□□□ -1.36
TSPAN3-209ENST00000560715 PIAS1O75925 651 aa6.57□□□□□ -1.36
TSPAN3-209ENST00000560715 KCNK2O95069 426 aa6.57□□□□□ -1.36
TSPAN3-209ENST00000560715 VIPP01282 170 aa6.57□□□□□ -1.36
TSPAN3-209ENST00000560715 GNAO1P09471 354 aa6.57□□□□□ -1.36
TSPAN3-209ENST00000560715 BFSP2Q13515 415 aa6.57□□□□□ -1.36
TSPAN3-209ENST00000560715 PLA1AQ53H76 456 aa6.57□□□□□ -1.36
TSPAN3-209ENST00000560715 CRB2Q5IJ48 1285 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms