RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 ROPN1LQ96C74 230 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 MED8Q96G25 268 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 TEX37Q96LM6 180 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 FRG2BQ96QU4 278 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 CDRT15Q96T59 188 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 SERPINI1Q99574 410 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 ACPTQ9BZG2 426 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 ELOVL6Q9H5J4 265 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 SGK2Q9HBY8 427 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 FZD3Q9NPG1 666 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 CD93Q9NPY3 652 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 CIDEBQ9UHD4 219 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 NDRG2Q9UN36 371 aaKnown RBP12.31□□□□□ -0.44
USP3-213ENST00000559711 KCNE2Q9Y6J6 123 aa12.31□□□□□ -0.44
USP3-213ENST00000559711 LRRC72A6NJI9 287 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 CHURC1-FNTBB4DL54 471 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 E7EQ34 232 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 H0YIV9 168 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 IFRD1O00458 451 aaPredicted RBP12.3□□□□□ -0.44
USP3-213ENST00000559711 NR5A2O00482 541 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 MRASO14807 208 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 CLGNO14967 610 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 ANKRD28O15084 1053 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 RSL1D1O76021 490 aaKnown RBP12.3□□□□□ -0.44
USP3-213ENST00000559711 IGLV3-19P01714 112 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 RPN2P04844 631 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 SLC2A4P14672 509 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 NPPBP16860 134 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 GNAZP19086 355 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 CAPN3P20807 821 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 DPP6P42658 865 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 DGKEP52429 567 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 PNLIPRP1P54315 467 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 KIAA1024LP59773 190 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 UFM1P61960 85 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 DOC2AQ14183 400 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 KIAA0040Q15053 153 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 IMPG1Q17R60 797 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 VPS26BQ4G0F5 336 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 XKR6Q5GH73 641 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 PIGGQ5H8A4 983 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 C1orf146Q5VVC0 180 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 GRHL2Q6ISB3 625 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 PTCRAQ6ISU1 281 aaPredicted RBP12.3□□□□□ -0.44
USP3-213ENST00000559711 CYP20A1Q6UW02 462 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 BNC2Q6ZN30 1099 aaPredicted RBP12.3□□□□□ -0.44
USP3-213ENST00000559711 RIPOR1Q6ZS17 1223 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 RETREG3Q86VR2 466 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 ZFAND4Q86XD8 727 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 SYTL1Q8IYJ3 562 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 SYNPOQ8N3V7 929 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 ENDOVQ8N8Q3 282 aaKnown RBP12.3□□□□□ -0.44
USP3-213ENST00000559711 PCYOX1LQ8NBM8 494 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 PPFIBP2Q8ND30 876 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 OR5AR1Q8NGP9 310 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 OR5K2Q8NHB8 316 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 PROKR1Q8TCW9 393 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 SETD7Q8WTS6 366 aaKnown RBP12.3□□□□□ -0.44
USP3-213ENST00000559711 MTFMTQ96DP5 389 aaKnown RBP12.3□□□□□ -0.44
USP3-213ENST00000559711 ACTL8Q9H568 366 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 DCLRE1BQ9H816 532 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 RNPEPL1Q9HAU8 725 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 LRTM1Q9HBL6 345 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 POLMQ9NP87 494 aaPredicted RBP12.3□□□□□ -0.44
USP3-213ENST00000559711 C1orf109Q9NX04 203 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 MAP10Q9P2G4 905 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 EBF1Q9UH73 591 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 DUSP12Q9UNI6 340 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 EIF3LQ9Y262 564 aaKnown RBP12.3□□□□□ -0.44
USP3-213ENST00000559711 PCDHGA7Q9Y5G6 932 aa12.3□□□□□ -0.44
USP3-213ENST00000559711 A0A1W2PP18 115 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 KANSL1LA0AUZ9 987 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 DYTNA2CJ06 578 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 FAM234BA2RU67 622 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 POM121BA6NF01 834 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 LATO43561 262 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 PDE5AO76074 875 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 ERGP11308 486 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 G6PDP11413 515 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 PCSK2P16519 638 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 JAK1P23458 1154 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 IL12AP29459 219 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 HSD17B2P37059 387 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 NEK2P51955 445 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 PSME3P61289 254 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 TBPL1P62380 186 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 ARHGAP19Q14CB8 494 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 ZNF423Q2M1K9 1284 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 SLCO4C1Q6ZQN7 724 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 Q6ZS52 159 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 SYT13Q7L8C5 426 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 CHST15Q7LFX5 561 aaPredicted RBP12.29□□□□□ -0.44
USP3-213ENST00000559711 HPS6Q86YV9 775 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 GALNT13Q8IUC8 556 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 TBC1D21Q8IYX1 336 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 PHC3Q8NDX5 983 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 WDR20Q8TBZ3 569 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 SPDL1Q96EA4 605 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 WDR34Q96EX3 536 aa12.29□□□□□ -0.44
USP3-213ENST00000559711 BMFQ96LC9 184 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms