RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 R3HDM2Q9Y2K5 976 aaKnown RBP12.57□□□□□ -0.4
TPM1-220ENST00000559556 REXO2Q9Y3B8 237 aaKnown RBP12.57□□□□□ -0.4
TPM1-220ENST00000559556 CSAG2Q9Y5P2 127 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 MAP1AP78559 2803 aaPredicted RBP12.57□□□□□ -0.4
TPM1-220ENST00000559556 HIVEP1P15822 2718 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 INTS1Q8N201 2190 aaKnown RBP12.56□□□□□ -0.4
TPM1-220ENST00000559556 HEATR9A2RTY3 570 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 GPC4O75487 556 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 IPO7O95373 1038 aaKnown RBP12.56□□□□□ -0.4
TPM1-220ENST00000559556 S1PR4O95977 384 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 PIM1P11309 404 aaPredicted RBP12.56□□□□□ -0.4
TPM1-220ENST00000559556 CD9P21926 228 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 ALAS2P22557 587 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 ITGA3P26006 1051 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 CCR7P32248 378 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 CSE1LP55060 971 aaKnown RBP12.56□□□□□ -0.4
TPM1-220ENST00000559556 NAP1L1P55209 391 aaKnown RBP12.56□□□□□ -0.4
TPM1-220ENST00000559556 NKG7Q16617 165 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 UNC5DQ6UXZ4 953 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 TICAM1Q8IUC6 712 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 MCATQ8IVS2 390 aaKnown RBP12.56□□□□□ -0.4
TPM1-220ENST00000559556 OR52K1Q8NGK4 314 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 OR2L8Q8NGY9 312 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 ASZ1Q8WWH4 475 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 HDAC10Q969S8 669 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 TTC1Q99614 292 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 CARD6Q9BX69 1037 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 INTS7Q9NVH2 962 aaKnown RBP12.56□□□□□ -0.4
TPM1-220ENST00000559556 CDC23Q9UJX2 597 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 KLHL20Q9Y2M5 609 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 HS3ST3B1Q9Y662 390 aa12.56□□□□□ -0.4
TPM1-220ENST00000559556 FITM1A5D6W6 292 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 ENO4A6NNW6 628 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 MIF4GDA9UHW6 222 aaKnown RBP12.55□□□□□ -0.4
TPM1-220ENST00000559556 E2F3O00716 465 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 ALOX12BO75342 701 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 SUN1O94901 812 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 FKBP9O95302 570 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 GOT2P00505 430 aaKnown RBP12.55□□□□□ -0.4
TPM1-220ENST00000559556 PTMAP06454 111 aaKnown RBP12.55□□□□□ -0.4
TPM1-220ENST00000559556 TSFMP43897 325 aaKnown RBP12.55□□□□□ -0.4
TPM1-220ENST00000559556 GLRBP48167 497 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 HSPA14Q0VDF9 509 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 HIF1AQ16665 826 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 TUBB8Q3ZCM7 444 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 ZC3H12BQ5HYM0 836 aaKnown RBP12.55□□□□□ -0.4
TPM1-220ENST00000559556 TCTE1Q5JU00 501 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 TSTD2Q5T7W7 516 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 B3GNTL1Q67FW5 361 aaPredicted RBP12.55□□□□□ -0.4
TPM1-220ENST00000559556 FCRL6Q6DN72 434 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 FIGLAQ6QHK4 219 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 KIRREL2Q6UWL6 708 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 ZNF534Q76KX8 674 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 KCNMB4Q86W47 210 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 UBL4BQ8N7F7 174 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 DNAAF3Q8N9W5 541 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 OR4L1Q8NH43 312 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 LKAAEAR1Q8TD35 194 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 PEX13Q92968 403 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 TSSK1BQ9BXA7 367 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 CUTCQ9NTM9 273 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 CTSFQ9UBX1 484 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 SLC2A6Q9UGQ3 507 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 NXT1Q9UKK6 140 aaKnown RBP12.55□□□□□ -0.4
TPM1-220ENST00000559556 AMFRQ9UKV5 643 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 ZNF407Q9C0G0 2248 aa12.55□□□□□ -0.4
TPM1-220ENST00000559556 HCFC1P51610 2035 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 PHF3Q92576 2039 aaKnown RBP12.54□□□□□ -0.4
TPM1-220ENST00000559556 TCRBV7S2A1N4TA0A589 114 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 RASGRF2O14827 1237 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 PRICKLE3O43900 615 aaPredicted RBP12.54□□□□□ -0.4
TPM1-220ENST00000559556 SLCO2B1O94956 709 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 GAS8O95995 478 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 MCM3P25205 808 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 AOAHP28039 575 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 SEMA3AQ14563 771 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 GRM7Q14831 915 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 OASLQ15646 514 aaKnown RBP12.54□□□□□ -0.4
TPM1-220ENST00000559556 AGAP7PQ5VUJ5 663 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 PEX26Q7Z412 305 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 TAX1BP1Q86VP1 789 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 TAB3Q8N5C8 712 aaPredicted RBP12.54□□□□□ -0.4
TPM1-220ENST00000559556 LMNTD1Q8N9Z9 388 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 ACRBPQ8NEB7 543 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 OR11G2Q8NGC1 345 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.54□□□□□ -0.4
TPM1-220ENST00000559556 ZNF778Q96MU6 729 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 AGAP4Q96P64 663 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 IL17FQ96PD4 163 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 SELENOSQ9BQE4 189 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 RAB11FIP5Q9BXF6 653 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 LHPPQ9H008 270 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 SEMA3GQ9NS98 782 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 IL1RAPL1Q9NZN1 696 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 PACSIN2Q9UNF0 486 aaPredicted RBP12.54□□□□□ -0.4
TPM1-220ENST00000559556 KLK4Q9Y5K2 254 aa12.54□□□□□ -0.4
TPM1-220ENST00000559556 VSTM2BA6NLU5 285 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 TARM1B6A8C7 271 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 CTSVO60911 334 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 APOA4P06727 396 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms